RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 E5RJQ4 531 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 SYNCRIPO60506 623 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 TBL1XO60907 577 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 C7P10643 843 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 ERCC5P28715 1186 aaPredicted RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 SLC6A4P31645 630 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 USP8P40818 1118 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 MTIF2P46199 727 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 COPAP53621 1224 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 YWHAZP63104 245 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 EML5Q05BV3 1969 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 LMAN2Q12907 356 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 NNTQ13423 1086 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 EIF4EBP2Q13542 120 aaPredicted RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 DUOXA1Q1HG43 343 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 N4BP2L1Q5TBK1 243 aaPredicted RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 DAB2IPQ5VWQ8 1189 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 KIAA1324Q6UXG2 1013 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 CHST9Q7L1S5 443 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 SLC41A1Q8IVJ1 513 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 DDX50Q9BQ39 737 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 TRIM62Q9BVG3 475 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 TMEM245Q9H330 911 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 POPDC2Q9HBU9 364 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 CD93Q9NPY3 652 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 ABCB8Q9NUT2 735 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 WSB2Q9NYS7 404 aaPredicted RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 USP36Q9P275 1121 aaKnown RBP11.22□□□□□ -0.61
SEC13-214ENST00000476597 DNAJC12Q9UKB3 198 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 PLA2G4CQ9UP65 541 aa11.22□□□□□ -0.61
SEC13-214ENST00000476597 ATXN2Q99700 1313 aaKnown RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 KCNJ18B7U540 433 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 FOXN3O00409 490 aaPredicted RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 CAPN9O14815 690 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 NDUFS2O75306 463 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 EPHX1P07099 455 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 PABPC1P11940 636 aaKnown RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 PRKCHP24723 683 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 CD6P30203 668 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 CLCN1P35523 988 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 ARID5AQ03989 594 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 PDCLQ13371 301 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 MAN2A1Q16706 1144 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 PTPRNQ16849 979 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 VWA3BQ502W6 1294 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 MS4A13Q5J8X5 152 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 MBLAC2Q68D91 279 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 DPY19L2P1Q6NXN4 242 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 SERPINA13PQ6UXR4 307 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 TAC4Q86UU9 113 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 AHI1Q8N157 1196 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 FIBINQ8TAL6 211 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 WFDC5Q8TCV5 224 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 CYB5D2Q8WUJ1 264 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 PRCCQ92733 491 aaPredicted RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 MYEOVQ96EZ4 313 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 SIPA1Q96FS4 1042 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 TOE1Q96GM8 510 aaKnown RBP11.21□□□□□ -0.61
SEC13-214ENST00000476597 LHX5Q9H2C1 402 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 NDST4Q9H3R1 872 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 CAPN10Q9HC96 672 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 GGA2Q9UJY4 613 aa11.21□□□□□ -0.61
SEC13-214ENST00000476597 TRUB2O95900 331 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 IGLV3-19P01714 112 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 IGLV3-25P01717 112 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 ATP5BP06576 529 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 GLI1P08151 1106 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 SERPINF2P08697 491 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 DLDP09622 509 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 HLA-EP13747 358 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 ENGP17813 658 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 POLR2EP19388 210 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 OXTRP30559 389 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 CD70P32970 193 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 TPMTP51580 245 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 PTK2Q05397 1052 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 GFPT1Q06210 699 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 CAMK2GQ13555 558 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 TAF5Q15542 800 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 ZC3H12AQ5D1E8 599 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 MIIPQ5JXC2 388 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 RABEPKQ7Z6M1 372 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 HJURPQ8NCD3 748 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms