RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TRIM24O15164 1050 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 TBL1XO60907 577 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 ADAM23O75077 832 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 DAB1O75553 588 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 ASLP04424 464 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 ACADMP11310 421 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 PABPC1P11940 636 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 POLR2EP19388 210 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 HOXD9P28356 352 aaPredicted RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 NOS2P35228 1153 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 MPLP40238 635 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 P2RY2P41231 377 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 STAT1P42224 750 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 WASP42768 502 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 COPB1P53618 953 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 SLC6A3Q01959 620 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 APBA1Q02410 837 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 CREB5Q02930 508 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 UBXN1Q04323 297 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 TYRO3Q06418 890 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 KCNMA1Q12791 1236 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 FILIP1LQ4L180 1135 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 PMS2CLQ68D20 193 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 TRIM72Q6ZMU5 477 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 PRR23CQ6ZRP0 262 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 SLC26A9Q7LBE3 791 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 RABEPKQ7Z6M1 372 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 CHSY1Q86X52 802 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 OLIG1Q8TAK6 271 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 DDX1Q92499 740 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 C18orf8Q96DM3 657 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 SLC39A13Q96H72 371 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 PIWIL1Q96J94 861 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 FCRL2Q96LA5 508 aaPredicted RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 CPXM1Q96SM3 734 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 RTKNQ9BST9 563 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 DUSP15Q9H1R2 295 aaPredicted RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 ARRDC1-AS1Q9H2J1 176 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 ACP6Q9NPH0 428 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 FAM207AQ9NSI2 230 aaPredicted RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 DDIT4Q9NX09 232 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 CACNA2D2Q9NY47 1150 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 THAP10Q9P2Z0 257 aaPredicted RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 LIMA1Q9UHB6 759 aaKnown RBP10.6□□□□□ -0.71
CCM2-208ENST00000476594 GGA2Q9UJY4 613 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 STON1Q9Y6Q2 735 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 WDR87Q6ZQQ6 2873 aa10.6□□□□□ -0.71
CCM2-208ENST00000476594 H0Y626 953 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 NDUFS2O75306 463 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 GABBR2O75899 941 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 F9P00740 461 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 ZNF806P0C7X5 589 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 DESP17661 470 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 CDH5P33151 784 aaPredicted RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 DHPSP49366 369 aaPredicted RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 POLR2FP61218 127 aaKnown RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 SFSWAPQ12872 951 aaKnown RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 GEN1Q17RS7 908 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 FNDC3BQ53EP0 1204 aaKnown RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 RNF219Q5W0B1 726 aaPredicted RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 OLFML1Q6UWY5 402 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 KIAA1324Q6UXG2 1013 aaKnown RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 FAM183BPQ6ZVS7 135 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 CHST9Q7L1S5 443 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 DGLUCYQ7Z3D6 616 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 SFTPA1Q8IWL2 248 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 DEFB106AQ8N104 65 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCM2-208ENST00000476594 ZNF397Q8NF99 534 aaPredicted RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 ADAM32Q8TC27 787 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 BPIFA3Q9BQP9 254 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 NAA15Q9BXJ9 866 aaKnown RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 ZDHHC4Q9NPG8 344 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 ABCB8Q9NUT2 735 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 POLR3BQ9NW08 1133 aaPredicted RBP10.59□□□□□ -0.71
CCM2-208ENST00000476594 STIM2Q9P246 746 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 SUN2Q9UH99 717 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 CYTH4Q9UIA0 394 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 SPTBN4Q9H254 2564 aa10.59□□□□□ -0.71
CCM2-208ENST00000476594 FRYLO94915 3013 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 MYO18AQ92614 2054 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 SYNJ2BP-COX16A0A087WUM0 186 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 KCNU1A8MYU2 1149 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 CAVIN2O95810 425 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 FYNP06241 537 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 EPHX1P07099 455 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 DLDP09622 509 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 PNMA6AP0CW24 399 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 GABRG2P18507 467 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 NDUFV2P19404 249 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 TACR2P21452 398 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 HLA-FP30511 346 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 OXTRP30559 389 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 HOXD12P35452 270 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms