RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 HEMK1Q9Y5R4 338 aaPredicted RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 MAU2Q9Y6X3 613 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 KIF20BQ96Q89 1820 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ERVK-7P63135 1459 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 AGLP35573 1532 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ABCA9Q8IUA7 1624 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ABCA6Q8N139 1617 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CRYBG1Q9Y4K1 1723 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 A0A1W2PQ72 361 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ZNF839A8K0R7 811 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 LINC01387J3KSC0 135 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 RTCAO00442 366 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 TXNDC9O14530 226 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 RASGRF2O14827 1237 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GYG2O15488 501 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 OIP5O43482 229 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 RAD51CO43502 376 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GATCO43716 136 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 JAK2O60674 1132 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ATG13O75143 517 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TMEM127O75204 238 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TIPRLO75663 272 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CIB2O75838 187 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 OR7A10O76100 309 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CYP17A1P05093 508 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PGK2P07205 417 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 DLATP10515 647 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 SLC5A1P13866 664 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ATP6V1B1P15313 513 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ZNF23P17027 643 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TYRP1P17643 537 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GAP43P17677 238 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 RPA1P27694 616 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PRDX6P30041 224 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TALDO1P37837 337 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 NR4A2P43354 598 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 NAMPTP43490 491 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MAPK9P45984 424 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PIP4K2AP48426 406 aaPredicted RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 NPY2RP49146 381 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ERVK-21P61565 698 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ERVK-9P63128 1117 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MRPS9P82933 396 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 OTUD4Q01804 1114 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 DLG1Q12959 904 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TARDBPQ13148 414 aaKnown RBP eCLIP4.26□□□□□ -1.73
CD55-208ENST00000476590 ORC1Q13415 861 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TFDP1Q14186 410 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GRM3Q14832 879 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SLC15A2Q16348 729 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TRMT5Q32P41 509 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 EML3Q32P44 896 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PPM1LQ5SGD2 360 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PPP1R26Q5T8A7 1209 aaPredicted RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 ATAD3BQ5T9A4 648 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 NT5DC1Q5TFE4 455 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CACHD1Q5VU97 1274 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ITPRIPL1Q6GPH6 555 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CGB2Q6NT52 195 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CYP20A1Q6UW02 462 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GSTA5Q7RTV2 222 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TMPRSS9Q7Z410 1059 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 LRP10Q7Z4F1 713 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 GALNT5Q7Z7M9 940 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 LRRC6Q86X45 466 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ANKLE2Q86XL3 938 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 UNC5CLQ8IV45 518 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PALM2Q8IXS6 379 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 NIM1KQ8IY84 436 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SRRM1Q8IYB3 904 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 CLYBLQ8N0X4 340 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CLIP4Q8N3C7 705 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 NKAIN3Q8N8D7 197 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ICA1LQ8NDH6 482 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 OR7D4Q8NG98 312 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 PHOSPHO2Q8TCD6 241 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ACTRT1Q8TDG2 376 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 POF1BQ8WVV4 589 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 STON2Q8WXE9 905 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TRIB2Q92519 343 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 LPGAT1Q92604 370 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MARC2Q969Z3 335 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MTBPQ96DY7 904 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ERLEC1Q96DZ1 483 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TXNDC15Q96J42 360 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MAGEB18Q96M61 343 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 DMRTB1Q96MA1 342 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SNX18Q96RF0 628 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TMEM109Q9BVC6 243 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 CINPQ9BW66 212 aaPredicted RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 CCDC106Q9BWC9 280 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 LACRTQ9GZZ8 138 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 USP44Q9H0E7 712 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 SLC6A17Q9H1V8 727 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SLC12A5Q9H2X9 1139 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SLA2Q9H6Q3 261 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 AZI2Q9H6S1 392 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TUFT1Q9NNX1 390 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms