RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FSIP1Q8NA03 581 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 PCYOX1LQ8NBM8 494 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 NGDNQ8NEJ9 315 aaKnown RBP6.67□□□□□ -1.34
VPS50-212ENST00000476413 ARRDC3Q96B67 414 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 HVCN1Q96D96 273 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 RRP36Q96EU6 259 aaKnown RBP6.67□□□□□ -1.34
VPS50-212ENST00000476413 PIGSQ96S52 555 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 MMS19Q96T76 1030 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 SENP7Q9BQF6 1050 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 ZNF747Q9BV97 191 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 CINPQ9BW66 212 aaPredicted RBP6.67□□□□□ -1.34
VPS50-212ENST00000476413 GAR1Q9NY12 217 aaKnown RBP6.67□□□□□ -1.34
VPS50-212ENST00000476413 MAP3K20Q9NYL2 800 aaKnown RBP6.67□□□□□ -1.34
VPS50-212ENST00000476413 BAG5Q9UL15 447 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 ST3GAL5Q9UNP4 418 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 AFG3L2Q9Y4W6 797 aa6.67□□□□□ -1.34
VPS50-212ENST00000476413 CCDC151A5D8V7 595 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 QSOX1O00391 747 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 MGST3O14880 152 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 HNRNPRO43390 633 aaKnown RBP6.66□□□□□ -1.34
VPS50-212ENST00000476413 HNRNPA1P09651 372 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS50-212ENST00000476413 FAM163BP0C2L3 166 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 CXCR5P32302 372 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 AVPR1BP47901 424 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 CCT8P50990 548 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 CYP4F2P78329 520 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 CFHR3Q02985 330 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS50-212ENST00000476413 CBFBQ13951 182 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 ANO7Q6IWH7 933 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 WDR93Q6P2C0 686 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 ZNF627Q7L945 461 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 PRRT2Q7Z6L0 340 aaPredicted RBP6.66□□□□□ -1.34
VPS50-212ENST00000476413 GALNT4Q8N4A0 578 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 PHF7Q9BWX1 381 aaPredicted RBP6.66□□□□□ -1.34
VPS50-212ENST00000476413 LRIT1Q9P2V4 623 aa6.66□□□□□ -1.34
VPS50-212ENST00000476413 COPG1Q9Y678 874 aaKnown RBP6.66□□□□□ -1.34
VPS50-212ENST00000476413 B4E171 279 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 NPIPB8E9PQR5 432 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 KLK10O43240 276 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 TSPAN3O60637 253 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 C1RP00736 705 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 KRT4P19013 534 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 SFPQP23246 707 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS50-212ENST00000476413 ELF1P32519 619 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 PNPLA4P41247 253 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 TSPAN7P41732 249 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 SIM1P81133 766 aaPredicted RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 PCID2Q5JVF3 399 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 WDR45BQ5MNZ6 344 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 CBWD5Q5RIA9 395 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 DENND2CQ68D51 928 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 FAM180BQ6P0A1 224 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 RSRC2Q7L4I2 434 aaKnown RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 LAS2Q8IYD9 372 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 LARP4BQ92615 738 aaKnown RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 CAVIN3Q969G5 261 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 BBC3Q96PG8 261 aaPredicted RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 CIPCQ9C0C6 399 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 CYP4F11Q9HBI6 524 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 TLR8Q9NR97 1041 aaKnown RBP6.65□□□□□ -1.34
VPS50-212ENST00000476413 SLC22A11Q9NSA0 550 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 HSF4Q9ULV5 492 aa6.65□□□□□ -1.34
VPS50-212ENST00000476413 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 GRM8O00222 908 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 PRYO14603 147 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 SEPT4O43236 478 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 ZNF202O95125 648 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 TBX18O95935 607 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 PLA2G5P39877 138 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 AGTR2P50052 363 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 COPB1P53618 953 aaKnown RBP6.64□□□□□ -1.35
VPS50-212ENST00000476413 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 ULK2Q8IYT8 1036 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 TSPYL6Q8N831 410 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 MAFAQ8NHW3 353 aaPredicted RBP6.64□□□□□ -1.35
VPS50-212ENST00000476413 ST8SIA4Q92187 359 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 RNF26Q9BY78 433 aaPredicted RBP6.64□□□□□ -1.35
VPS50-212ENST00000476413 JMJD4Q9H9V9 463 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 IL21RQ9HBE5 538 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 PDE11AQ9HCR9 933 aa6.64□□□□□ -1.35
VPS50-212ENST00000476413 C3orf70A6NLC5 250 aaPredicted RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 C16orf96A6NNT2 1141 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 H3BNC9 293 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 GCOM1H8Y6P7 765 aaPredicted RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 FYB1O15117 783 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 DHX16O60231 1041 aaKnown RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 LYL1P12980 280 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 CPA1P15085 419 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 CAPN3P20807 821 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 NDUFS1P28331 727 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 STAT6P42226 847 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 WDR5P61964 334 aaKnown RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 THOC5Q13769 683 aaKnown RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 HECTD2Q5U5R9 776 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 NAPRTQ6XQN6 538 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 TBC1D1Q86TI0 1168 aaPredicted RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 TERB1Q8NA31 727 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 TBC1D5Q92609 795 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms