RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 UBA3Q8TBC4 463 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 WFDC5Q8TCV5 224 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 WFIKKN2Q8TEU8 576 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 SLC35F5Q8WV83 523 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 TFAP2BQ92481 460 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 EDEM1Q92611 657 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 LMLNQ96KR4 655 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 LRRC4Q9HBW1 653 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 CNGB3Q9NQW8 809 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 ABCC13Q9NSE7 274 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 PCOLCE2Q9UKZ9 415 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 ITPR1Q14643 2758 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 IGF2RP11717 2491 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 TP53BP1Q12888 1972 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 PMM2O15305 246 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 TSPAN3O60637 253 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 DKK1O94907 266 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 ACSL1P33121 698 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 CACUL1Q86Y37 369 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 LMO3Q8TAP4 145 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 MYO19Q96H55 970 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 GSDMAQ96QA5 445 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 ORAI3Q9BRQ5 295 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 C6orf106Q9H6K1 298 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 RMND1Q9NWS8 449 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 TOR4AQ9NXH8 423 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 EIF2B4Q9UI10 523 aaKnown RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 KIAA1257Q9ULG3 409 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 FNDC3AQ9Y2H6 1198 aaKnown RBP13.67□□□□□ -0.22
MRPL55-228ENST00000476267 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 PLXNA2O75051 1894 aa13.67□□□□□ -0.22
MRPL55-228ENST00000476267 C10orf142B7Z368 130 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PAEPP09466 180 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 ACADMP11310 421 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 CD19P15391 556 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 TBXAS1P24557 533 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 SLC6A4P31645 630 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 FMO5P49326 533 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 YWHAEP62258 255 aaKnown RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 HLA-BQ31612 363 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 MPP7Q5T2T1 576 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PIK3R6Q5UE93 754 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 CHST9Q7L1S5 443 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 SLCO6A1Q86UG4 719 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 AHI1Q8N157 1196 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 SIX6OS1Q8N1H7 587 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 RNF139Q8WU17 664 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 IRGQQ8WZA9 623 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 TMA16Q96EY4 203 aaKnown RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PRICKLE1Q96MT3 831 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 IPO9Q96P70 1041 aaKnown RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 GAREM1Q9H706 876 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 OSGEPQ9NPF4 335 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-228ENST00000476267 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
MRPL55-228ENST00000476267 LOC400499M0QZD8 3231 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 CER1O95813 267 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 FYNP06241 537 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 DLDP09622 509 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 PABPC1P11940 636 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 LCP1P13796 627 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 CD70P32970 193 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 RDXP35241 583 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 MATKP42679 507 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 RPL34P49207 117 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 RING1Q06587 406 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 MBLAC2Q68D91 279 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 NADSYN1Q6IA69 706 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 IL27RAQ6UWB1 636 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 CCNI2Q6ZMN8 369 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-228ENST00000476267 FAM124AQ86V42 546 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 PNPLA1Q8N8W4 532 aa13.65□□□□□ -0.22
MRPL55-228ENST00000476267 ERCC4Q92889 916 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms