RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 HESX1Q9UBX0 185 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CYTH4Q9UIA0 394 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 XPO7Q9UIA9 1087 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 RALYQ9UKM9 306 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 NAALADL1Q9UQQ1 740 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 HBS1LQ9Y450 684 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 PCDHB4Q9Y5E5 795 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 HELZP42694 1942 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MYOFQ9NZM1 2061 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 DMXL2Q8TDJ6 3036 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CACNA1BQ00975 2339 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 LAMA5O15230 3695 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 M0QYV0 167 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 NPC1O15118 1278 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 P4HA2O15460 535 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 ZBTB24O43167 697 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SYNCRIPO60506 623 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CYBBP04839 570 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 EPHX1P07099 455 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 PROS1P07225 676 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 ACSL1P33121 698 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 DPP6P42658 865 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 MARSP56192 900 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 YWHAEP62258 255 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 GCNT1Q02742 428 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 KCNH2Q12809 1159 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 EIF4EBP2Q13542 120 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CAMK2GQ13555 558 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 EIF4HQ15056 248 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 TAF5Q15542 800 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 PLEKHG6Q3KR16 790 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 FSCBQ5H9T9 825 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 KCNT1Q5JUK3 1230 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 DENND1BQ6P3S1 775 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 GJB7Q6PEY0 223 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 FOXR2Q6PJQ5 311 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SERPINA13PQ6UXR4 307 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 MMS22LQ6ZRQ5 1243 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CHST9Q7L1S5 443 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CACUL1Q86Y37 369 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 IRF2BP1Q8IU81 584 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 TRIM59Q8IWR1 403 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SIX6OS1Q8N1H7 587 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 WDTC1Q8N5D0 677 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CADM4Q8NFZ8 388 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 OR2T3Q8NH03 318 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 DQX1Q8TE96 717 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 IRGQQ8WZA9 623 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SIPA1Q96FS4 1042 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SLC39A13Q96H72 371 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CCDC34Q96HJ3 373 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 FCRL2Q96LA5 508 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 HSFY1Q96LI6 401 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 PRICKLE1Q96MT3 831 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 SRRTQ9BXP5 876 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 MIS12Q9H081 205 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 IL21RQ9HBE5 538 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 PRSS16Q9NQE7 514 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 OLA1Q9NTK5 396 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 TJP2Q9UDY2 1190 aa7.31□□□□□ -1.24
HDAC3-207ENST00000475549 INTS6Q9UL03 887 aaKnown RBP7.31□□□□□ -1.24
HDAC3-207ENST00000475549 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 GON4LQ3T8J9 2241 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 BECN2A8MW95 431 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 PAPSS1O43252 624 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 HYAL3O43820 417 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 SH3BP5O60239 455 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 ACSL4O60488 711 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 OPHN1O60890 802 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 TBL1XO60907 577 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CBFA2T3O75081 653 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 NDUFS2O75306 463 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 LATS1O95835 1130 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 LTFP02788 710 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CAPNS1P04632 268 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 DLDP09622 509 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CTSOP43234 321 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CLCN6P51797 869 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 TBX4P57082 545 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RPS14P62263 151 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RPS24P62847 133 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 PITX1P78337 314 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 SIM1P81133 766 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RING1Q06587 406 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 GRIK2Q13002 908 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 STARD3Q14849 445 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CCDC40Q4G0X9 1142 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 MPP7Q5T2T1 576 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 DCAF12L1Q5VU92 463 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 MBLAC2Q68D91 279 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 DPY19L2P1Q6NXN4 242 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 UNQ6494/PRO21346Q6UXR6 183 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 DBX2Q6ZNG2 339 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 TMEM110Q86TL2 294 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 FAM124AQ86V42 546 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RGL4Q8IZJ4 473 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms