RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 RPS24P62847 133 aaKnown RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 NOMO3P69849 1222 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 FMO1Q01740 532 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 CDR2Q01850 454 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 NNTQ13423 1086 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 SDE2Q6IQ49 451 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 SLC26A9Q7LBE3 791 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 LUZP1Q86V48 1076 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 CHSY1Q86X52 802 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 LGI2Q8N0V4 545 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 CFAP52Q8N1V2 620 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 FAM160A2Q8N612 972 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 WFDC5Q8TCV5 224 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 RLN3Q8WXF3 142 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 DDX50Q9BQ39 737 aaKnown RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 ABCB8Q9NUT2 735 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 SEPT11Q9NVA2 429 aaKnown RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 EBF1Q9UH73 591 aa16.61■□□□□ 0.25
ITGB1-210ENST00000474568 PTPRZ1P23471 2315 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-210ENST00000474568 FANCMQ8IYD8 2048 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 TFE3P19532 575 aaPredicted RBP16.6■□□□□ 0.25
ITGB1-210ENST00000474568 PTMSP20962 102 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 TACR2P21452 398 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 HLA-FP30511 346 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 GBP1P32455 592 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 SULT1E1P49888 294 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 ZNF445P59923 1031 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 FILIP1LQ4L180 1135 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 TMEM215Q68D42 235 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 LAIR1Q6GTX8 287 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 KIAA1211LQ6NV74 962 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 MMS22LQ6ZRQ5 1243 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 RASSF3Q86WH2 238 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 CARNMT1Q8N4J0 409 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 ATP6V0D2Q8N8Y2 350 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 HJURPQ8NCD3 748 aaPredicted RBP16.6■□□□□ 0.25
ITGB1-210ENST00000474568 KCNV2Q8TDN2 545 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
ITGB1-210ENST00000474568 PCDHB18PQ96TA0 734 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 C11orf70Q9BRQ4 267 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 SLC2A11Q9BYW1 496 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 SLC6A17Q9H1V8 727 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 ELOVL2Q9NXB9 296 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 STON1Q9Y6Q2 735 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 KIAA1549LQ6ZVL6 1849 aa16.6■□□□□ 0.25
ITGB1-210ENST00000474568 RIF1Q5UIP0 2472 aaKnown RBP16.6■□□□□ 0.25
ITGB1-210ENST00000474568 A0A1W2PQF6 199 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 M0QYT0 321 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 SERPINC1P01008 464 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 CD70P32970 193 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 NOS2P35228 1153 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 GGCXP38435 758 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 IL12RB1P42701 662 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 GABRB2P47870 512 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 NUMBP49757 651 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 SPEM2Q0P670 501 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 CCDC6Q16204 474 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 ZSCAN23Q3MJ62 389 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 MS4A13Q5J8X5 152 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 OTUD1Q5VV17 481 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-210ENST00000474568 CHST9Q7L1S5 443 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 CIR1Q86X95 450 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-210ENST00000474568 ZDHHC17Q8IUH5 632 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 MFN1Q8IWA4 741 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-210ENST00000474568 CYB5D2Q8WUJ1 264 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 UCMAQ8WVF2 138 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 AZIN2Q96A70 460 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 ADAM33Q9BZ11 813 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.25
ITGB1-210ENST00000474568 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.257e-9■□□□□ 9.6
ITGB1-210ENST00000474568 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 USP18Q9UMW8 372 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 DAAM1Q9Y4D1 1078 aa16.59■□□□□ 0.25
ITGB1-210ENST00000474568 TYW5A2RUC4 315 aaKnown RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 GJB6O95452 261 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 PABPC1P11940 636 aaKnown RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 GABRG2P18507 467 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 ABCB4P21439 1286 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 BCKDHBP21953 392 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 CCR1P32246 355 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 FLT3P36888 993 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 MATKP42679 507 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 EIF4EBP2Q13542 120 aaPredicted RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 ZNF234Q14588 700 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 BTN2A3PQ96KV6 586 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 TBCBQ99426 244 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 PARD6AQ9NPB6 346 aa16.58■□□□□ 0.24
ITGB1-210ENST00000474568 METTL5Q9NRN9 209 aaKnown RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 THAP10Q9P2Z0 257 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms