RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CYP3A4P08684 503 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 IL6RP08887 468 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 CHN1P15882 459 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ZFXP17010 805 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 PRKCHP24723 683 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 CLCN2P51788 898 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 FAM189BP81408 668 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 GALNT2Q10471 571 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 THOC5Q13769 683 aaKnown RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 PTPRRQ15256 657 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 GPR162Q16538 588 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 NFIL3Q16649 462 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ABHD17BQ5VST6 288 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ACSM6Q6P461 480 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 USP51Q70EK9 711 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 MAVSQ7Z434 540 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 LPIN2Q92539 896 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF747Q9BV97 191 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 RNF26Q9BY78 433 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF768Q9H5H4 540 aaKnown RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF703Q9H7S9 590 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-212ENST00000473961 RAB21Q9UL25 225 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 GABRQQ9UN88 632 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 SLC12A4Q9UP95 1085 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 TTLL3Q9Y4R7 772 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 A0A1W2PPH5 198 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 CCDC151A5D8V7 595 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 TMEM200CA6NKL6 621 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 MPPED1O15442 326 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 TIPRLO75663 272 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 SPDEFO95238 335 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 VNN1O95497 513 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 PDHA1P08559 390 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 NPSP0C0P6 89 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 TMIGD3P0DMS9 266 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ITGAMP11215 1152 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 RPS6KB1P23443 525 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 PSMA4P25789 261 aaKnown RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 DUSP1P28562 367 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 CCR9P51686 369 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 RPL15P61313 204 aaKnown RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 KRT32Q14532 448 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ICAM4Q14773 271 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 SEC23BQ15437 767 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 FAM187BQ17R55 369 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 KRBA2Q6ZNG9 492 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 PARS2Q7L3T8 475 aaKnown RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF551Q7Z340 670 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 R3HCC1LQ7Z5L2 792 aaKnown RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 C1orf210Q8IVY1 113 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ARHGEF19Q8IW93 802 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ZMIZ2Q8NF64 920 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ABHD11Q8NFV4 315 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 DVL3Q92997 716 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-212ENST00000473961 ARRDC3Q96B67 414 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 APOPT1Q96IL0 206 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 NEUROD6Q96NK8 337 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 CHCHD6Q9BRQ6 235 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 FUZQ9BT04 418 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 HTATIP2Q9BUP3 242 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 TAOK3Q9H2K8 898 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 KCTD5Q9NXV2 234 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 TFCP2L1Q9NZI6 479 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 POLG2Q9UHN1 485 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 FZD1Q9UP38 647 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 PCDHA10Q9Y5I2 948 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 LMTK3Q96Q04 1460 aa4.68□□□□□ -1.66
BRCA1-212ENST00000473961 CCDC187A0A096LP49 1063 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 GOLGA6L10A0A0M3HER8 536 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 UNC119BA6NIH7 251 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 AGAP5A6NIR3 686 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 PRSS47A8MTI9 375 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 QSOX1O00391 747 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 SPTLC2O15270 562 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 SPRY2O43597 315 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 LPXNO60711 386 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 URI1O94763 535 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-212ENST00000473961 HEXIM1O94992 359 aaKnown RBP4.67□□□□□ -1.66
BRCA1-212ENST00000473961 TJP3O95049 919 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 CCNDBP1O95273 360 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 RHOP08100 348 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 CSF1P09603 554 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 ALADP13716 330 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 NDUFB7P17568 137 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 ABCD3P28288 659 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 SLC8A1P32418 973 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 ARL3P36405 182 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 FOLR3P41439 243 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 POLD2P49005 469 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 TAS2R50P59544 299 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 E2F1Q01094 437 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 SP2Q02086 613 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 NUCB1Q02818 461 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 CDSNQ15517 529 aa4.67□□□□□ -1.66
BRCA1-212ENST00000473961 TSTQ16762 297 aaKnown RBP4.67□□□□□ -1.66
BRCA1-212ENST00000473961 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms