RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 GFPT2O94808 682 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 TRUB2O95900 331 aaKnown RBP11.97□□□□□ -0.49
CPNE1-222ENST00000473373 PENKP01210 267 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-222ENST00000473373 CYP11B1P15538 503 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 POLR2EP19388 210 aaKnown RBP11.97□□□□□ -0.49
CPNE1-222ENST00000473373 CLCN1P35523 988 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 CCDC6Q16204 474 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 FILIP1LQ4L180 1135 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 SYPL2Q5VXT5 272 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 SERPINA13PQ6UXR4 307 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 CHST9Q7L1S5 443 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 FAM71AQ8IYT1 594 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 DEFB106AQ8N104 65 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 RLN3Q8WXF3 142 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 STK33Q9BYT3 514 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 ABCB8Q9NUT2 735 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 TMEM63CQ9P1W3 806 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 CYTH4Q9UIA0 394 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 PLA2G4CQ9UP65 541 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 ADAMTS9Q9P2N4 1935 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 EPG5Q9HCE0 2579 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 F5H5T6 163 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 F8VZ95 297 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 H0Y626 953 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 GOLGA8SH3BPF8 625 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 NPC1O15118 1278 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 LRP3O75074 770 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ADAM23O75077 832 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 MOCS3O95396 460 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ERBB2P04626 1255 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 EPHX1P07099 455 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 GLI1P08151 1106 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 SLC2A3P11169 496 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ACADMP11310 421 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 PTMSP20962 102 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 HOXD9P28356 352 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 STAT1P42224 750 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 KLK7P49862 253 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ST8SIA6P61647 398 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 NNTQ13423 1086 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 EIF4HQ15056 248 aaKnown RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ST3GAL2Q16842 350 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 GEN1Q17RS7 908 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 PLK5Q496M5 336 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 PPM1JQ5JR12 505 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 FAM102AQ5T9C2 384 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 CDKAL1Q5VV42 579 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 LPCAT2Q7L5N7 544 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 CYP2U1Q7Z449 544 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 CACUL1Q86Y37 369 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 LGI2Q8N0V4 545 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 AHI1Q8N157 1196 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 C18orf8Q96DM3 657 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 LOXL4Q96JB6 756 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ACOX2Q99424 681 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 SEMA4GQ9NTN9 838 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
CPNE1-222ENST00000473373 ELOVL2Q9NXB9 296 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 GGA2Q9UJY4 613 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 STAP1Q9ULZ2 295 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 SLC27A6Q9Y2P4 619 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 STARD13Q9Y3M8 1113 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 STON1Q9Y6Q2 735 aa11.96□□□□□ -0.49
CPNE1-222ENST00000473373 TNRC6BQ9UPQ9 1833 aaKnown RBP11.95□□□□□ -0.5
CPNE1-222ENST00000473373 LGALS16A8MUM7 142 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 WASH3PC4AMC7 463 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 M0QYT0 321 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 GFRA2O00451 464 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 TIMM44O43615 452 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 FOXD2O60548 495 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-222ENST00000473373 EPN2O95208 641 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
CPNE1-222ENST00000473373 MMEP08473 750 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 ADRB1P08588 477 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 CISD3P0C7P0 127 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
CPNE1-222ENST00000473373 CCR1P32246 355 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 MPLP40238 635 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 SULT1E1P49888 294 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 RPL6Q02878 288 aaKnown RBP11.95□□□□□ -0.5
CPNE1-222ENST00000473373 ZNF234Q14588 700 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 PTPN20Q4JDL3 420 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 NAA35Q5VZE5 725 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 LRSAM1Q6UWE0 723 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 PRR23CQ6ZRP0 262 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 RASSF3Q86WH2 238 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 ZDHHC17Q8IUH5 632 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 FAM217AQ8IXS0 508 aa11.95□□□□□ -0.5
CPNE1-222ENST00000473373 CFAP52Q8N1V2 620 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms