RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 MPLP40238 635 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 ENPP2Q13822 863 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 CCDC6Q16204 474 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 MAP7D1Q3KQU3 841 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 DCAF6Q58WW2 860 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 PLA2G2CQ5R387 149 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 OR6B2Q6IFH4 312 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 HJURPQ8NCD3 748 aaPredicted RBP23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 ANKRD20A12PQ8NF67 263 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 SLC2A13Q96QE2 648 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 CALCOCO1Q9P1Z2 691 aa23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 CDV3Q9UKY7 258 aaKnown RBP23.41■■□□□ 1.34
PTP4A1-203ENST00000473334 TYW5A2RUC4 315 aaKnown RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 TIMM44O43615 452 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 MOCS2O96007 188 aaPredicted RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 NDUFV2P19404 249 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 IL12RB1P42701 662 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 COPB1P53618 953 aaKnown RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 PITX1P78337 314 aaPredicted RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 CDK17Q00537 523 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 ZNF234Q14588 700 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 STARD3Q14849 445 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 TMEM215Q68D42 235 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 OLFML1Q6UWY5 402 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 DEFB106AQ8N104 65 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 ZNF557Q8N988 423 aaPredicted RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 TMEM35BQ8NCS4 154 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 ERLEC1Q96DZ1 483 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 PRICKLE1Q96MT3 831 aaPredicted RBP23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 SYNCQ9H7C4 482 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 ABCB8Q9NUT2 735 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 TMEM63CQ9P1W3 806 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 GGA2Q9UJY4 613 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 NUP205Q92621 2012 aa23.4■■□□□ 1.34
PTP4A1-203ENST00000473334 BCLAF3A2AJT9 711 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 PABPC1P11940 636 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 CDH5P33151 784 aaPredicted RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 KLK7P49862 253 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 CREB5Q02930 508 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 ARID5AQ03989 594 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 TYRO3Q06418 890 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 EIF4EBP2Q13542 120 aaPredicted RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 ZC3H12AQ5D1E8 599 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC26A9Q7LBE3 791 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 KIAA0907Q7Z7F0 614 aaPredicted RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 AHI1Q8N157 1196 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 C12orf50Q8NA57 414 aaPredicted RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 DDX1Q92499 740 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 NUCKS1Q9H1E3 243 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 FAM204AQ9H8W3 233 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 VPS45Q9NRW7 570 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 LIMA1Q9UHB6 759 aaKnown RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 MBD1Q9UIS9 605 aaPredicted RBP23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 DAAM1Q9Y4D1 1078 aa23.39■■□□□ 1.33
PTP4A1-203ENST00000473334 CKAP5Q14008 2032 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 MUC22E2RYF6 1773 aaPredicted RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 MAP3K13O43283 966 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 GRAP2O75791 330 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC6A3Q01959 620 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 SF3A2Q15428 464 aaKnown RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 MS4A13Q5J8X5 152 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 TAF3Q5VWG9 929 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 CHST9Q7L1S5 443 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 LPCAT2Q7L5N7 544 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 ERMP1Q7Z2K6 904 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 NOP9Q86U38 636 aaKnown RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 ZDHHC17Q8IUH5 632 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 FRMD1Q8N878 549 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 ATP6V0D2Q8N8Y2 350 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 ZNF397Q8NF99 534 aaPredicted RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 WFDC5Q8TCV5 224 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 NETO1Q8TDF5 533 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 SORCS1Q8WY21 1168 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 BTN2A3PQ96KV6 586 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 FAM207AQ9NSI2 230 aaPredicted RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.38■■□□□ 1.332e-12■□□□□ 10.1
PTP4A1-203ENST00000473334 STIM2Q9P246 746 aa23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 XPO7Q9UIA9 1087 aaKnown RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 TNRC6BQ9UPQ9 1833 aaKnown RBP23.38■■□□□ 1.33
PTP4A1-203ENST00000473334 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 LGALS16A8MUM7 142 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 ZNF217O75362 1048 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 DAB1O75553 588 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 DHPSP49366 369 aaPredicted RBP23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 POLR2FP61218 127 aaKnown RBP23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 NCAPHQ15003 741 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 FUT11Q495W5 492 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 AASDHQ4L235 1098 aaPredicted RBP23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 CYP2U1Q7Z449 544 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 MFN1Q8IWA4 741 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 EPS8L1Q8TE68 723 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 MYEOVQ96EZ4 313 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 MRGPRX1Q96LB2 322 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 DDIT4Q9NX09 232 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC12A6Q9UHW9 1150 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 SIK3Q9Y2K2 1263 aa23.37■■□□□ 1.33
PTP4A1-203ENST00000473334 CEP192Q8TEP8 1941 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SYNCRIPO60506 623 aaKnown RBP23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 LSM8O95777 96 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms