RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PNMA6AP0CW24 399 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 NCAM1P13591 858 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 ACSL1P33121 698 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 GPD2P43304 727 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 IRAK1P51617 712 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 BCAT1P54687 386 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 LRRC63Q05C16 580 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 SEMA3BQ13214 749 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 ST3GAL2Q16842 350 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 PRAMEF14Q5SWL7 426 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 PIK3R6Q5UE93 754 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 CHST9Q7L1S5 443 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 KIAA0907Q7Z7F0 614 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 CPXM2Q8N436 756 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 PNPLA1Q8N8W4 532 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 C1orf216Q8TAB5 229 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 DQX1Q8TE96 717 aaKnown RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 TMA16Q96EY4 203 aaKnown RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 MYO19Q96H55 970 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 FCRL2Q96LA5 508 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 PRICKLE1Q96MT3 831 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 IPO9Q96P70 1041 aaKnown RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 DCLK3Q9C098 648 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 NUCKS1Q9H1E3 243 aaKnown RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 C6orf106Q9H6K1 298 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 UBE2TQ9NPD8 197 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 PRSS16Q9NQE7 514 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 STOML2Q9UJZ1 356 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 ANGPTL2Q9UKU9 493 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 SLC6A14Q9UN76 642 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 WNT9AO14904 365 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 PMM2O15305 246 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 PAPSS1O43252 624 aaPredicted RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 AP5Z1O43299 807 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 IGLV3-27P01718 113 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 LTFP02788 710 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SERPINF2P08697 491 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 PAEPP09466 180 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CD6P30203 668 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CHKAP35790 457 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 RPL34P49207 117 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 METAP1P53582 386 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 NUCB2P80303 420 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 GOLGA8FQ08AF8 430 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 GOLGA8DPQ0D2H9 430 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 PDAP1Q13442 181 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 DUOXA1Q1HG43 343 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 HSP90AA4PQ58FG1 418 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 ZC3H12AQ5D1E8 599 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 ADGRF1Q5T601 910 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SDE2Q6IQ49 451 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 TRMT11Q7Z4G4 463 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 ANKS1BQ7Z6G8 1248 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SIX6OS1Q8N1H7 587 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CHCHD4Q8N4Q1 142 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 ZCCHC9Q8N567 271 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 MINDY1Q8N5J2 469 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 PLD4Q96BZ4 506 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SIPA1Q96FS4 1042 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SLC39A13Q96H72 371 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 FAXDC2Q96IV6 333 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 MRGPRX3Q96LB0 322 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 NT5C1BQ96P26 610 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SCNM1Q9BWG6 230 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 NUSAP1Q9BXS6 441 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 GTPBP4Q9BZE4 634 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 TMEM245Q9H330 911 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 METTL14Q9HCE5 456 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 ABCC13Q9NSE7 274 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 USP36Q9P275 1121 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 HESX1Q9UBX0 185 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 SERGEFQ9UGK8 458 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 EIF2B4Q9UI10 523 aaKnown RBP8.41□□□□□ -1.06
USP48-207ENST00000471752 SLCO3A1Q9UIG8 710 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 KLK13Q9UKR3 277 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 STRIP2Q9ULQ0 834 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CNTN6Q9UQ52 1028 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 ZNF510Q9Y2H8 683 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 LOC400499M0QZD8 3231 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 ATRXP46100 2492 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 CABIN1Q9Y6J0 2220 aa8.41□□□□□ -1.06
USP48-207ENST00000471752 TTC34A8MYJ7 566 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 E5RJQ4 531 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 RNF103O00237 685 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TAF4O00268 1085 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 PLK4O00444 970 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 PSMA7O14818 248 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ACSL4O60488 711 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 GRAP2O75791 330 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 MOCS2O96007 188 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 SETSIPP0DME0 302 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms