RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HARS2P49590 506 aaKnown RBP19.88■□□□□ 0.77
PSPC1-203ENST00000471658 MMRN1Q13201 1228 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 PPP6R3Q5H9R7 873 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-203ENST00000471658 MYEOVQ96EZ4 313 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 BTN2A3PQ96KV6 586 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 HAPLN3Q96S86 360 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 OSBPL9Q96SU4 736 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 SLC12A6Q9UHW9 1150 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 ACSL4O60488 711 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 ZRANB2O95218 330 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■■■ 28
PSPC1-203ENST00000471658 TUBB4AP04350 444 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 SP100P23497 879 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-203ENST00000471658 GBP2P32456 591 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-203ENST00000471658 AIF1P55008 147 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 AMPD2Q01433 879 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 DPYSL2Q16555 572 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 MS4A13Q5J8X5 152 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 ARTNQ5T4W7 220 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 RAP1GAP2Q684P5 730 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 HLA-CQ95604 372 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 ASB16Q96NS5 453 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 OSBPL2Q9H1P3 480 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 GDE1Q9NZC3 331 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 TRDMT1O14717 391 aaKnown RBP19.87■□□□□ 0.77
PSPC1-203ENST00000471658 MBTPS2O43462 519 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 CREB3O43889 395 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 IL4RP24394 825 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 MLLT6P55198 1093 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-203ENST00000471658 DPYSL3Q14195 570 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 KRT81Q14533 505 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 SPOCD1Q6ZMY3 1216 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 Q6ZNB5 142 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 PSTKQ8IV42 348 aaKnown RBP19.87■□□□□ 0.77
PSPC1-203ENST00000471658 EXD1Q8NHP7 514 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 SMARCD2Q92925 531 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 HERPUD2Q9BSE4 406 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 PRDM6Q9NQX0 595 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 OR12D3Q9UGF7 316 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 ZMYM5Q9UJ78 669 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 SH3BP1Q9Y3L3 701 aa19.87■□□□□ 0.77
PSPC1-203ENST00000471658 KRT10P13645 584 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 GOT1P17174 413 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 SLC6A4P31645 630 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 SEMA3BQ13214 749 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 ZNF77Q15935 545 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 FAM133BQ5BKY9 247 aaKnown RBP19.86■□□□□ 0.77
PSPC1-203ENST00000471658 RFWD3Q6PCD5 774 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 HTR3DQ70Z44 454 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 CCDC50Q8IVM0 306 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 BBS7Q8IWZ6 715 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 RCOR2Q8IZ40 523 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 FAM71BQ8TC56 605 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 MS4A14Q96JA4 679 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 PRMT1Q99873 361 aaKnown RBP19.86■□□□□ 0.77
PSPC1-203ENST00000471658 HEMGNQ9BXL5 484 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 CALN1Q9BXU9 219 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 TMEM51Q9NW97 253 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 SMARCAL1Q9NZC9 954 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 CWC15Q9P013 229 aaKnown RBP19.86■□□□□ 0.77
PSPC1-203ENST00000471658 SAR1BQ9Y6B6 198 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 PRUNE2Q8WUY3 3088 aa19.86■□□□□ 0.77
PSPC1-203ENST00000471658 CEP104O60308 925 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 URI1O94763 535 aaPredicted RBP19.85■□□□□ 0.77
PSPC1-203ENST00000471658 FCARP24071 287 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 WEE1P30291 646 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 SLC11A2P49281 568 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 USP4Q13107 963 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 SMAD4Q13485 552 aaKnown RBP19.85■□□□□ 0.77
PSPC1-203ENST00000471658 AUHQ13825 339 aaKnown RBP19.85■□□□□ 0.77
PSPC1-203ENST00000471658 ODF2Q5BJF6 829 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 TANGO2Q6ICL3 276 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 KIF18AQ8NI77 898 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 UBE2Q2Q8WVN8 375 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 NECTIN4Q96NY8 510 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 DCLK3Q9C098 648 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 CARD9Q9H257 536 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 LSM7Q9UK45 103 aaKnown RBP19.85■□□□□ 0.77
PSPC1-203ENST00000471658 VANGL2Q9ULK5 521 aa19.85■□□□□ 0.77
PSPC1-203ENST00000471658 TSPAN3O60637 253 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 LRIG2O94898 1065 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 LAMP2P13473 410 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 TACR2P21452 398 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 CDKN2BP42772 138 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 IRAK1P51617 712 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 VCPP55072 806 aaKnown RBP19.84■□□□□ 0.77
PSPC1-203ENST00000471658 ADCY2Q08462 1091 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 PDK2Q15119 407 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 DNTTIP2Q5QJE6 756 aaKnown RBP19.84■□□□□ 0.77
PSPC1-203ENST00000471658 KAZNQ674X7 775 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 FBXL22Q6P050 247 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 CHSY1Q86X52 802 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 ZNF683Q8IZ20 524 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 CELF5Q8N6W0 485 aaKnown RBP19.84■□□□□ 0.77
PSPC1-203ENST00000471658 TSC1Q92574 1164 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 AZIN2Q96A70 460 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 RBM41Q96IZ5 413 aaKnown RBP19.84■□□□□ 0.77
PSPC1-203ENST00000471658 CAPZA3Q96KX2 299 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 C1orf74Q96LT6 269 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 LINC00597Q9H2U6 94 aa19.84■□□□□ 0.77
PSPC1-203ENST00000471658 RRAGDQ9NQL2 400 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms