RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MRPS21P82921 87 aaKnown RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 KDSRQ06136 332 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TCF15Q12870 199 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 GAS6Q14393 721 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ANGPT1Q15389 498 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TSR1Q2NL82 804 aaKnown RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 MS4A13Q5J8X5 152 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ACBD5Q5T8D3 534 aaPredicted RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 RNF43Q68DV7 783 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 DNAJC24Q6P3W2 148 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 Q6ZS52 159 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 EMC1Q8N766 993 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ZNF557Q8N988 423 aaPredicted RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 TERB1Q8NA31 727 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 JOSD2Q8TAC2 188 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 RXFP2Q8WXD0 754 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 BHMTQ93088 406 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TRIM11Q96F44 468 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 P2RY11Q96G91 374 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 CFAP57Q96MR6 1250 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ADAM33Q9BZ11 813 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ISCUQ9H1K1 167 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 WDCPQ9H6R7 721 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 PIGVQ9NUD9 493 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ZNHIT6Q9NWK9 470 aaKnown RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 ARHGEF38Q9NXL2 777 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 COX16Q9P0S2 106 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ADAMTS1Q9UHI8 967 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TYW5A2RUC4 315 aaKnown RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 ANKRD62A6NC57 917 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 TMCO5BA8MYB1 307 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 PAPSS2O95340 614 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 MYBL1P10243 752 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 TFE3P19532 575 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 TACR2P21452 398 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 RRM1P23921 792 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 HOXD9P28356 352 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 RDXP35241 583 aaKnown RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 RFC1P35251 1148 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 MESP2Q0VG99 397 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 TBX2Q13207 712 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 CCDC14Q49A88 953 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 HSF5Q4G112 596 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 PPP1R15BQ5SWA1 713 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 PLEKHA7Q6IQ23 1121 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 RFWD3Q6PCD5 774 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 WDR59Q6PJI9 974 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 STRADAQ7RTN6 431 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 HJURPQ8NCD3 748 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 USP33Q8TEY7 942 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 MRFAP1L1Q96HT8 127 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 PRMT1Q99873 361 aaKnown RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.84■□□□□ 0.13
SDC3-203ENST00000471567 PRMT8Q9NR22 394 aaPredicted RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 PARVAQ9NVD7 372 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 ARHGAP20Q9P2F6 1191 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 XPO7Q9UIA9 1087 aaKnown RBP15.84■□□□□ 0.13
SDC3-203ENST00000471567 STARD13Q9Y3M8 1113 aa15.84■□□□□ 0.13
SDC3-203ENST00000471567 CACNA1IQ9P0X4 2223 aa15.83■□□□□ 0.13
SDC3-203ENST00000471567 KIAA1549LQ6ZVL6 1849 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 F5H5T6 163 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 TRIM24O15164 1050 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 TBL1XO60907 577 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 MFAP3LO75121 409 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 PLEKP08567 350 aaPredicted RBP15.83■□□□□ 0.12
SDC3-203ENST00000471567 GPD1P21695 349 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 KIR2DL1P43626 348 aaPredicted RBP15.83■□□□□ 0.12
SDC3-203ENST00000471567 ZNF75DP51815 510 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 ZNF528Q3MIS6 628 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 RAP1GAP2Q684P5 730 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 TMC6Q7Z403 805 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 CHSY1Q86X52 802 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 CNGA4Q8IV77 575 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 MAML2Q8IZL2 1156 aaPredicted RBP15.83■□□□□ 0.12
SDC3-203ENST00000471567 RPLP0P6Q8NHW5 317 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 CENPIQ92674 756 aaPredicted RBP15.83■□□□□ 0.12
SDC3-203ENST00000471567 ACDQ96AP0 544 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 TKTL2Q9H0I9 626 aa15.83■□□□□ 0.12
SDC3-203ENST00000471567 A0A087X0T9 212 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 AKR1B15C9JRZ8 316 aaPredicted RBP15.82■□□□□ 0.12
SDC3-203ENST00000471567 PAGE1O75459 146 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 GJB6O95452 261 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 ADCY5O95622 1261 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 FAM228BP0C875 321 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 SGSHP51688 502 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 ZNF143P52747 638 aaPredicted RBP15.82■□□□□ 0.12
SDC3-203ENST00000471567 ATP11AP98196 1134 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
SDC3-203ENST00000471567 MAMLD1Q13495 774 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 E2F5Q15329 346 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 C10orf76Q5T2E6 689 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 TTC39BQ5VTQ0 682 aaPredicted RBP15.82■□□□□ 0.12
SDC3-203ENST00000471567 DCUN1D2Q6PH85 259 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 SYT13Q7L8C5 426 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 LGI2Q8N0V4 545 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 C1orf74Q96LT6 269 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 PRICKLE1Q96MT3 831 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms