RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 VITQ6UXI7 678 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ARHGAP12Q8IWW6 846 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 BBS7Q8IWZ6 715 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 NPWQ8N729 165 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 PLD5Q8N7P1 536 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 MRPS31Q92665 395 aaKnown RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 MS4A14Q96JA4 679 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 C16orf45Q96MC5 204 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 SERPINB11Q96P15 392 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 CSPG4P5Q96PW8 444 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 FAM83CQ9BQN1 747 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 LUC7LQ9NQ29 371 aaKnown RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 STAP1Q9ULZ2 295 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 JRKLQ9Y4A0 524 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 OR51B4Q9Y5P0 310 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 KIF26AQ9ULI4 1882 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 hCG_1818297A0A087WSY0 165 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 TRAV19A0A0A6YYK7 116 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 WASH4PA8MWX3 477 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF487B1APH4 448 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 CAPN9O14815 690 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 ACSL4O60488 711 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FGF19O95750 216 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 KRT10P13645 584 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 CCR1P32246 355 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 CXCR5P32302 372 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 HCAR3P49019 387 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FCHO2Q0JRZ9 810 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 SMAD4Q13485 552 aaKnown RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 HTR4Q13639 388 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 AUHQ13825 339 aaKnown RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 BOLA3Q53S33 107 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 ATAT1Q5SQI0 421 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FAM182AQ5T1J6 154 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FYB2Q5VWT5 728 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 NAIF1Q69YI7 327 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 RHBDF2Q6PJF5 856 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 SPOCD1Q6ZMY3 1216 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 PEX26Q7Z412 305 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 VSIG1Q86XK7 387 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 RHOT1Q8IXI2 618 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 KIAA1958Q8N8K9 716 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 LRRN4CLQ8ND94 238 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 EXD1Q8NHP7 514 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 WFDC5Q8TCV5 224 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 RNF139Q8WU17 664 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 RSAD2Q8WXG1 361 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 SMARCD2Q92925 531 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 PPP2R3CQ969Q6 453 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 PLD4Q96BZ4 506 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 TRIM44Q96DX7 344 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF419Q96HQ0 510 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 RNF157Q96PX1 679 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 OSBPL9Q96SU4 736 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 WDCPQ9H6R7 721 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FAM204AQ9H8W3 233 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 ZWILCHQ9H900 591 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 TRPC7Q9HCX4 862 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 HPS4Q9NQG7 708 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 GDE1Q9NZC3 331 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 CFAP97Q9P2B7 532 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 DNAI1Q9UI46 699 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 HCN2Q9UL51 889 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 TTC7AQ9ULT0 858 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 R3HDM2Q9Y2K5 976 aaKnown RBP10.24□□□□□ -0.77
SF3A1-207ENST00000471342 MUC3AQ02505 3323 aa10.24□□□□□ -0.77
SF3A1-207ENST00000471342 MYH10P35580 1976 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 SYNJ2BP-COX16A0A087WUM0 186 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 E2F8A0AVK6 867 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CCDC66A2RUB6 948 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 LOC730098B7Z3J9 87 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 NRDCO43847 1150 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 KIF5CO60282 957 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 LATS1O95835 1130 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CD160O95971 181 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 PEX11BO96011 259 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 PENKP01210 267 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 MBL2P11226 248 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 IL9P15248 144 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 GOT1P17174 413 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CORO1AP31146 461 aaKnown RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 MTHFRP42898 656 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 AIF1P55008 147 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 COG7P83436 770 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 LLGL1Q15334 1064 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 KCTD19Q17RG1 926 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 EML3Q32P44 896 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 NCBP2-AS2Q69YL0 99 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 SLC9A4Q6AI14 798 aa10.23□□□□□ -0.77
SF3A1-207ENST00000471342 CXorf57Q6NSI4 855 aaKnown RBP10.23□□□□□ -0.77
SF3A1-207ENST00000471342 RFWD3Q6PCD5 774 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms