RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 NANOGP1Q8N7R0 232 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 SRFBP1Q8NEF9 429 aaKnown RBP4.49□□□□□ -1.69
BRCA2-202ENST00000470094 STYXQ8WUJ0 223 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 MCRS1Q96EZ8 462 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 REXO5Q96IC2 774 aaKnown RBP4.49□□□□□ -1.69
BRCA2-202ENST00000470094 CRB3Q9BUF7 120 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 PRDM16Q9HAZ2 1276 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 SPATA31A5Q5VU36 1347 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 EMSYQ7Z589 1322 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 SPATA31A7Q8IWB4 1347 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 LOC105369274A0A096LPK9 316 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 LOC102723532A0A0G2JNH3 316 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 C2CD4BA6NLJ0 364 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 F5H423 210 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 PPEF2O14830 753 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 NKX2-8O15522 239 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 MOSPD3O75425 235 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 CTSAP10619 480 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ST6GAL1P15907 406 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 TFEBP19484 476 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 HOXD9P28356 352 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 HOXA7P31268 230 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF84P51523 738 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 DMWDQ09019 674 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 PUM3Q15397 648 aaKnown RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 PFKFB4Q16877 469 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ZACNQ401N2 412 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 PAPD7Q5XG87 772 aaKnown RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 C11orf87Q6NUJ2 197 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 DHRS13Q6UX07 377 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF793Q6ZN11 406 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 DEF8Q6ZN54 512 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 MRPL10Q7Z7H8 261 aaKnown RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ANKRD13BQ86YJ7 626 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 OR4N4Q8N0Y3 316 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 SPICE1Q8N0Z3 855 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 VPS37AQ8NEZ2 397 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 BCAS4Q8TDM0 211 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 KAT2BQ92831 832 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 COQ8BQ96D53 544 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 TRMT61AQ96FX7 289 aaKnown RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 GPR78Q96P69 363 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 SPRTNQ9H040 489 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-202ENST00000470094 CCDC134Q9H6E4 229 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ERVK-5Q9HDB9 667 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 TMEM184CQ9NVA4 438 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 MTMR4Q9NYA4 1195 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ELOVL5Q9NYP7 299 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 B3GNT3Q9Y2A9 372 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 RIPOR2Q9Y4F9 1068 aa4.48□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF521Q96K83 1311 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 SLC22A23A1A5C7 686 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 PLEKHD1A6NEE1 506 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 KIF28PB7ZC32 967 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 SYT5O00445 386 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 TPD52L2O43399 206 aaKnown RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ALDOAP04075 364 aaKnown RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ITGA2BP08514 1039 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 AKR1A1P14550 325 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 PDIA3P30101 505 aaKnown RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 SOX2P48431 317 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 MORC3Q14149 939 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 EARS2Q5JPH6 523 aaKnown RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF569Q5MCW4 686 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ATPAF1Q5TC12 328 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ATG16L2Q8NAA4 619 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ADPRHL1Q8NDY3 354 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 C16orf52Q8NHV5 167 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 SCARB1Q8WTV0 552 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 RSC1A1Q92681 617 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 SLC39A13Q96H72 371 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 PSMD1Q99460 953 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 TMEM79Q9BSE2 394 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 KATNAL1Q9BW62 490 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 GATA5Q9BWX5 397 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 MLXIPLQ9NP71 852 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 TAGLN3Q9UI15 199 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 IPO11Q9UI26 975 aaKnown RBP4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 ZMYM2Q9UBW7 1377 aa4.47□□□□□ -1.69
BRCA2-202ENST00000470094 C3orf70A6NLC5 250 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 M0QYT0 321 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 TLR2O60603 784 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 LARGE1O95461 756 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 SGPL1O95470 568 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 CYP19A1P11511 503 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 GRK5P34947 590 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 POLE2P56282 527 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 SLC37A1P57057 533 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RHBDL3P58872 404 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 TAS2R50P59544 299 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms