RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DHX58Q96C10 678 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 NAF1Q96HR8 494 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 NT5C1AQ9BXI3 368 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 DNAI2Q9GZS0 605 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 SLC39A2Q9NP94 309 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 GDF3Q9NR23 364 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 ABCB8Q9NUT2 735 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 KBTBD4Q9NVX7 518 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 SUN2Q9UH99 717 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 MYO18BQ8IUG5 2567 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 CYSRT1A8MQ03 144 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ATP5BP06576 529 aaKnown RBP19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 GLDCP23378 1020 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 HLA-FP30511 346 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 PIK3CAP42336 1068 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ARRB1P49407 418 aaPredicted RBP19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 HARS2P49590 506 aaKnown RBP19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 TLE3Q04726 772 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 FBXL19Q6PCT2 694 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 SPACA3Q8IXA5 215 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ARHGAP18Q8N392 663 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 TAF4BQ92750 862 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 TWNKQ96RR1 684 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ORAI3Q9BRQ5 295 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 DUSP16Q9BY84 665 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 FBXL12Q9NXK8 326 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ATMQ13315 3056 aa19.81■□□□□ 0.76
NCKIPSD-209ENST00000470006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 ERVH48-1M5A8F1 160 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 YKT6O15498 198 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 RNASEH1O60930 286 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 CD58P19256 250 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 POLR2EP19388 210 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 HOXD9P28356 352 aaPredicted RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 CD38P28907 300 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 ASPAP45381 313 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 KCNH2Q12809 1159 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 SFSWAPQ12872 951 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 KNOP1Q1ED39 458 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 BROXQ5VW32 411 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 MBLAC2Q68D91 279 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 NCEH1Q6PIU2 408 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 C12orf56Q8IXR9 622 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 AHI1Q8N157 1196 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 PLD4Q96BZ4 506 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 TMA16Q96EY4 203 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 GGA2Q9UJY4 613 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 CLCA2Q9UQC9 943 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 USP3Q9Y6I4 520 aa19.8■□□□□ 0.76
NCKIPSD-209ENST00000470006 LRRC72A6NJI9 287 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 WNT1P04628 370 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 DLDP09622 509 aaKnown RBP19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 PABPC1P11940 636 aaKnown RBP19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 PDCP20941 246 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 GALCP54803 685 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 YWHAGP61981 247 aaKnown RBP eCLIP19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 DLG4P78352 724 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 SLC39A14Q15043 492 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 SHBQ15464 509 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 PCSK4Q6UW60 755 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 UNC13DQ70J99 1090 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 GOLGA5Q8TBA6 731 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 IMPG2Q9BZV3 1241 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 PABPC3Q9H361 631 aaKnown RBP19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 CUEDC2Q9H467 287 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 MTG2Q9H4K7 406 aa19.79■□□□□ 0.76
NCKIPSD-209ENST00000470006 PYCARD-AS1I3L0S3 204 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 RNASEH2AO75792 299 aaKnown RBP19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 ASS1P00966 412 aaKnown RBP19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 ST8SIA6P61647 398 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 CLDN10P78369 228 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 BNIP3Q12983 259 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 ILKQ13418 452 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 STK38Q15208 465 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 TBC1D25Q3MII6 688 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 ZACNQ401N2 412 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 SLC45A4Q5BKX6 768 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 PPP1R26Q5T8A7 1209 aaPredicted RBP19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 KDM7AQ6ZMT4 941 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 USP30Q70CQ3 517 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 ADIPOR2Q86V24 386 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 FMNL3Q8IVF7 1028 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 IQUBQ8NA54 791 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 USP28Q96RU2 1077 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 OMDQ99983 421 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 CLMPQ9H6B4 373 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 SCML1Q9UN30 329 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 COL6A6A6NMZ7 2263 aa19.78■□□□□ 0.76
NCKIPSD-209ENST00000470006 A0A1W2PP55 124 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 HLA-DRAP01903 254 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 CKMT2P17540 419 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 EPHA8P29322 1005 aaPredicted RBP19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 PDE4CQ08493 712 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 INCA1Q0VD86 236 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 ZNF394Q53GI3 561 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 ARHGAP40Q5TG30 622 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 SV2AQ7L0J3 742 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 FAM217AQ8IXS0 508 aa19.77■□□□□ 0.76
NCKIPSD-209ENST00000470006 ZNF248Q8NDW4 579 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms