RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 TBL1XO60907 577 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 TRUB2O95900 331 aaKnown RBP18.98■□□□□ 0.63
PHGDH-204ENST00000469443 IGLV3-25P01717 112 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 NDUFV2P19404 249 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 HLA-FP30511 346 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 IL12RB1P42701 662 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 ZNF234Q14588 700 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 STARD3Q14849 445 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 SF3A2Q15428 464 aaKnown RBP18.98■□□□□ 0.63
PHGDH-204ENST00000469443 TAF5Q15542 800 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 TMEM215Q68D42 235 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 RNF43Q68DV7 783 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 NADSYN1Q6IA69 706 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHGDH-204ENST00000469443 HJURPQ8NCD3 748 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-204ENST00000469443 NETO1Q8TDF5 533 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 WFIKKN2Q8TEU8 576 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 SLC2A13Q96QE2 648 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 CIPCQ9C0C6 399 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 PLCB1Q9NQ66 1216 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 VPS45Q9NRW7 570 aa18.98■□□□□ 0.63
PHGDH-204ENST00000469443 MBD1Q9UIS9 605 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-204ENST00000469443 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 MAP3K13O43283 966 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 HSF2BPO75031 334 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 MOCS2O96007 188 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 APOEP02649 317 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 MYL5Q02045 173 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 C1QBPQ07021 282 aaKnown RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 PTPN20Q4JDL3 420 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 AASDHQ4L235 1098 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 DCAF6Q58WW2 860 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 OR6B2Q6IFH4 312 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 FAM183BPQ6ZVS7 135 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 LPCAT2Q7L5N7 544 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 DGLUCYQ7Z3D6 616 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 KIAA0907Q7Z7F0 614 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 DEFB106AQ8N104 65 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 FRMD1Q8N878 549 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 ZNF557Q8N988 423 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 C12orf50Q8NA57 414 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-204ENST00000469443 ERLEC1Q96DZ1 483 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 STK33Q9BYT3 514 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 ABCB8Q9NUT2 735 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 LAMA1P25391 3075 aa18.97■□□□□ 0.63
PHGDH-204ENST00000469443 TYW5A2RUC4 315 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 F8VZ95 297 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 GDF9O60383 454 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 ZNF217O75362 1048 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 CAVIN2O95810 425 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 ERBB2P04626 1255 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 PABPC1P11940 636 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 CYP11B1P15538 503 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 CDH5P33151 784 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 DHPSP49366 369 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 ATXN1P54253 815 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 PITX1P78337 314 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 CDK17Q00537 523 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 FOXK2Q01167 660 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 ARID5AQ03989 594 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 EIF4EBP2Q13542 120 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 ZC3H12AQ5D1E8 599 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 SPDYCQ5MJ68 293 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 OLFML1Q6UWY5 402 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 SLC36A4Q6YBV0 504 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 CYP2U1Q7Z449 544 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 AHI1Q8N157 1196 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 TMEM35BQ8NCS4 154 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 WFDC5Q8TCV5 224 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 SORCS1Q8WY21 1168 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 MRGPRX1Q96LB2 322 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 PRICKLE1Q96MT3 831 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 RTKNQ9BST9 563 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 NUCKS1Q9H1E3 243 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 GANQ9H2C0 597 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 SMOC1Q9H4F8 434 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 SYNCQ9H7C4 482 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 GGA2Q9UJY4 613 aa18.96■□□□□ 0.63
PHGDH-204ENST00000469443 NYNRINQ9P2P1 1898 aaKnown RBP18.96■□□□□ 0.63
PHGDH-204ENST00000469443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 GRAP2O75791 330 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 SLC6A3Q01959 620 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 FUT11Q495W5 492 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 MS4A13Q5J8X5 152 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 CHST9Q7L1S5 443 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 SLC26A9Q7LBE3 791 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ADIPOR2Q86V24 386 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ZDHHC17Q8IUH5 632 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 TMEFF1Q8IYR6 380 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ATP6V0D2Q8N8Y2 350 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ANKRD20A12PQ8NF67 263 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ZNF397Q8NF99 534 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-204ENST00000469443 DDX1Q92499 740 aaKnown RBP18.95■□□□□ 0.62
PHGDH-204ENST00000469443 BTN2A3PQ96KV6 586 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 SLC6A17Q9H1V8 727 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 FAM204AQ9H8W3 233 aa18.95■□□□□ 0.62
PHGDH-204ENST00000469443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.95■□□□□ 0.62
PHGDH-204ENST00000469443 STIM2Q9P246 746 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms