RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CUL2Q13617 745 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 HNRNPDQ14103 355 aaKnown RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 PTPRNQ16849 979 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 KIF19Q2TAC6 998 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 EDRF1Q3B7T1 1238 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 FNDC3BQ53EP0 1204 aaKnown RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 DCAF17Q5H9S7 520 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 ANKRD40Q6AI12 368 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 CCNI2Q6ZMN8 369 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 CLEC4CQ8WTT0 213 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 PLD4Q96BZ4 506 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 MYEOVQ96EZ4 313 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 ZSWIM1Q9BR11 485 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 PRSS16Q9NQE7 514 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 SNX11Q9Y5W9 270 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 CELSR3Q9NYQ7 3312 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 KNL1Q8NG31 2342 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 NBEAQ8NFP9 2946 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 TRIM49BA6NDI0 452 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 TIMM44O43615 452 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 SLC6A4P31645 630 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 CD70P32970 193 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 MATKP42679 507 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 HARS2P49590 506 aaKnown RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 NUMBP49757 651 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 RPS14P62263 151 aaKnown RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 ENPEPQ07075 957 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 SGO2Q562F6 1265 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 PMF1Q6P1K2 205 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 DBX2Q6ZNG2 339 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 RHBDD1Q8TEB9 315 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 RNF139Q8WU17 664 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 BIRC7Q96CA5 298 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 ZDHHC5Q9C0B5 715 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 DNAI2Q9GZS0 605 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 LHX5Q9H2C1 402 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 STIM2Q9P246 746 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 GGA2Q9UJY4 613 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDAC3-204ENST00000469207 PLA2G4CQ9UP65 541 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 CKAP5Q14008 2032 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 PKD1L2Q7Z442 2459 aa12.79□□□□□ -0.36
HDAC3-204ENST00000469207 O00370 1275 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 TBL1XO60907 577 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 BCAT1P54687 386 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 SLC8A3P57103 927 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 DAOAP59103 153 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 IL9RQ01113 521 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 BST2Q10589 180 aaKnown RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 ADGRF1Q5T601 910 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 ISM2Q6H9L7 571 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 MMS22LQ6ZRQ5 1243 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 TTC39CQ8N584 583 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 UBR7Q8N806 425 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 KAT5Q92993 513 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 TM9SF3Q9HD45 589 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 ABCC13Q9NSE7 274 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 OLA1Q9NTK5 396 aaKnown RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 STOML2Q9UJZ1 356 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
HDAC3-204ENST00000469207 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
HDAC3-204ENST00000469207 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 FAM149AA5PLN7 773 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 FAM47DPA6NHR8 397 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 FSBPO95073 299 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 CER1O95813 267 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 VDRP11473 427 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
HDAC3-204ENST00000469207 CCDC157Q569K6 752 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 FAM133BQ5BKY9 247 aaKnown RBP12.77□□□□□ -0.37
HDAC3-204ENST00000469207 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 NADSYN1Q6IA69 706 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 TMEM270Q6UE05 265 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 GLRX5Q86SX6 157 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 SIX6OS1Q8N1H7 587 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 SLC35F5Q8WV83 523 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 HNRNPLLQ8WVV9 542 aaKnown RBP12.77□□□□□ -0.37
HDAC3-204ENST00000469207 KCTD13Q8WZ19 329 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 MYO19Q96H55 970 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 ORAI3Q9BRQ5 295 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 EBF2Q9HAK2 575 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 ANKRD6Q9Y2G4 727 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms