RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CTRB1P17538 263 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TPTEP56180 551 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 EHHADHQ08426 723 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CAPSQ13938 189 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 INSCQ1MX18 579 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 FAM110CQ1W6H9 321 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TRIM71Q2Q1W2 868 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CENPPQ6IPU0 288 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 WDR59Q6PJI9 974 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 USP37Q86T82 979 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 LSMEM2Q8N112 164 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ATL1Q8WXF7 558 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 DPF3Q92784 378 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TAMM41Q96BW9 452 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 THAP11Q96EK4 314 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 GIMAP5Q96F15 307 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 C12orf42Q96LP6 360 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 PACSIN1Q9BY11 444 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CADM1Q9BY67 442 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 C1orf112Q9NSG2 853 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 APPL1Q9UKG1 709 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 RPL26L1Q9UNX3 145 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CHKBQ9Y259 395 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 IFT52Q9Y366 437 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 GRAP2O75791 330 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ANPEPP15144 967 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 OAZ1P54368 228 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 PPP3CAQ08209 521 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 DPYSQ14117 519 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 HABP4Q5JVS0 413 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 HEATR4Q86WZ0 1026 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 C4orf19Q8IY42 314 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 PLEKHA8Q96JA3 519 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 SENP7Q9BQF6 1050 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 SENP6Q9GZR1 1112 aaPredicted RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 DDX47Q9H0S4 455 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 SERHL2Q9H4I8 314 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 SMYD3Q9H7B4 428 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TRMT13Q9NUP7 481 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ABI2Q9NYB9 513 aaPredicted RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 TXNDC16Q9P2K2 825 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ZFP69BQ9UJL9 534 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 RIMKLBQ9ULI2 386 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ADRB2P07550 413 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 KRT10P13645 584 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 CFL1P23528 166 aaKnown RBP10.22□□□□□ -0.77
NUP50-214ENST00000469163 DLG1Q12959 904 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 NOGQ13253 232 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 KYNUQ16719 465 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 CAND1Q86VP6 1230 aaKnown RBP10.22□□□□□ -0.77
NUP50-214ENST00000469163 METTL25Q8N6Q8 603 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 SLC22A8Q8TCC7 542 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 KIF12Q96FN5 646 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 FMO2Q99518 471 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 C17orf80Q9BSJ5 609 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 CCDC134Q9H6E4 229 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 FAM49BQ9NUQ9 324 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 DOCK2Q92608 1830 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 KIF13BQ9NQT8 1826 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 POMCP01189 267 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 VCLP18206 1134 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 YWHAGP61981 247 aaKnown RBP eCLIP10.22□□□□□ -0.77
NUP50-214ENST00000469163 AP2B1P63010 937 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 RGS21Q2M5E4 152 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 KLHL38Q2WGJ6 581 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 SCARA3Q6AZY7 606 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 LPCAT2Q7L5N7 544 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 ACTRT1Q8TDG2 376 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 EPS8L3Q8TE67 593 aaKnown RBP10.22□□□□□ -0.77
NUP50-214ENST00000469163 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 ZNF75CPQ92670 426 aaPredicted RBP10.22□□□□□ -0.77
NUP50-214ENST00000469163 BORCS5Q969J3 196 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 C10orf88Q9H8K7 445 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 SYNGAP1Q96PV0 1343 aa10.22□□□□□ -0.77
NUP50-214ENST00000469163 THAP12O43422 761 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 BAIAP3O94812 1187 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 AMPD1P23109 780 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 RABGGTBP53611 331 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 BFSP1Q12934 665 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 DSC3Q14574 896 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 MESDQ14696 234 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 MOXD1Q6UVY6 613 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 GPR141Q7Z602 305 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 CCDC25Q86WR0 208 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 DHRS9Q9BPW9 319 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 FAM118BQ9BPY3 351 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 RPF1Q9H9Y2 349 aaKnown RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 KLHL11Q9NVR0 708 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms