RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 RNASELQ05823 741 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 VSTM1Q6UX27 236 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 TRIM72Q6ZMU5 477 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 CPOQ8IVL8 374 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 LAS2Q8IYD9 372 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 TRMT61AQ96FX7 289 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 UROC1Q96N76 676 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 SEC62Q99442 399 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 CRYL1Q9Y2S2 319 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 SALL3Q9BXA9 1300 aa5.67□□□□□ -1.5
GAPVD1-211ENST00000467707 M0QYT0 321 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 HEXIM1O94992 359 aaKnown RBP5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 PDE8BO95263 885 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 PNPLA4P41247 253 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 RCAN1P53805 252 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 CYP4F2P78329 520 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 CNGA3Q16281 694 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 Q6ZPA2 131 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 ZNF627Q7L945 461 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 RASAL3Q86YV0 1011 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 TMTC1Q8IUR5 882 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 ESX1Q8N693 406 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 AKAP1Q92667 903 aaKnown RBP eCLIP5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 PRR11Q96HE9 360 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 MPP4Q96JB8 637 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 DUSP26Q9BV47 211 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 TMEM160Q9NX00 188 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 RAB21Q9UL25 225 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 DNAJC16Q9Y2G8 782 aa5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 SIRT4Q9Y6E7 314 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-211ENST00000467707 UBE2Q2LH0YL09 131 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 EYA2O00167 538 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ZNF213O14771 459 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 EPB41L2O43491 1005 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 EXOC3O60645 756 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 POLBP06746 335 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 C6P13671 934 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 CNTFP26441 200 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 MAPK7Q13164 816 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 KCNB1Q14721 858 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 MFSD13AQ14CX5 517 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 LARS2Q15031 903 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 TSTD2Q5T7W7 516 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 TMEM65Q6PI78 240 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 NAPRTQ6XQN6 538 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 SLC39A5Q6ZMH5 540 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 DCDC5Q6ZRR9 648 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 MRGPRGQ86SM5 289 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ANKRD44Q8N8A2 993 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 MAFAQ8NHW3 353 aaPredicted RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 EIF2AK1Q9BQI3 630 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 REEP2Q9BRK0 252 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 HTATIP2Q9BUP3 242 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ELOVL1Q9BW60 279 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 JMJD4Q9H9V9 463 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 SUFUQ9UMX1 484 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 VPS4AQ9UN37 437 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 PCDHA10Q9Y5I2 948 aa5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 COPG1Q9Y678 874 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-211ENST00000467707 ARID1BQ8NFD5 2236 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 A0A087X1B8 175 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 PRRT4C9JH25 899 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 J3KRW8 73 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CLIC1O00299 241 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 FYB1O15117 783 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 RAMP2O60895 175 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 GCATO75600 419 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 HNRNPCP07910 306 aaKnown RBP eCLIP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CYP21A2P08686 494 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CHRM5P08912 532 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CHN1P15882 459 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 HOXD12P35452 270 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CCR5P51681 352 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 TBL3Q12788 808 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 DDX10Q13206 875 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 PDCLQ13371 301 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 THOC5Q13769 683 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 GPR162Q16538 588 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 ZNF484Q5JVG2 852 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 ANO7Q6IWH7 933 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 DENND1BQ6P3S1 775 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 TSPYL6Q8N831 410 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 ENDOVQ8N8Q3 282 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 SARAFQ96BY9 339 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 ZNF845Q96IR2 970 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 CCDC17Q96LX7 622 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 PPP1R10Q96QC0 940 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 TRIM2Q9C040 744 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 SFXN1Q9H9B4 322 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 PLEKHA2Q9HB19 425 aa5.64□□□□□ -1.51
GAPVD1-211ENST00000467707 PDE11AQ9HCR9 933 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms