RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 LRRC36Q1X8D7 754 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 TRMT10BQ6PF06 316 aaKnown RBP16.01■□□□□ 0.15
CHD1L-205ENST00000467213 PACS1Q6VY07 963 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 ZCCHC23Q6ZST2 131 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 ERI1Q8IV48 349 aaKnown RBP16.01■□□□□ 0.15
CHD1L-205ENST00000467213 POU5F2Q8N7G0 328 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 LRGUKQ96M69 825 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 CDH19Q9H159 772 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 ZNHIT2Q9UHR6 403 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 AP4B1Q9Y6B7 739 aa16.01■□□□□ 0.15
CHD1L-205ENST00000467213 IGKV6D-21A0A0A0MT36 114 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 PRSS51A0A1B0GVH4 220 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 RGSL1A5PLK6 1076 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 PRPSAP2O60256 369 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 RALBP11234 206 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 BCAR1P56945 870 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 MYBPC1Q00872 1141 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 MTERF2Q49AM1 385 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
CHD1L-205ENST00000467213 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
CHD1L-205ENST00000467213 AK5Q9Y6K8 562 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 TXNDC9O14530 226 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 COQ9O75208 318 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 PGM3O95394 542 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
CHD1L-205ENST00000467213 MMRN1Q13201 1228 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 MTM1Q13496 603 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 DPYSQ14117 519 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 ZYXQ15942 572 aaKnown RBP16■□□□□ 0.15
CHD1L-205ENST00000467213 MYLK3Q32MK0 819 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 PIGGQ5H8A4 983 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 TTC39CQ8N584 583 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 TAB3Q8N5C8 712 aaPredicted RBP16■□□□□ 0.15
CHD1L-205ENST00000467213 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 MRGBPQ9NV56 204 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 KIAA1257Q9ULG3 409 aa16■□□□□ 0.15
CHD1L-205ENST00000467213 TCP10L2B9ZVM9 353 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 HNRNPRO43390 633 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 LYPLA1O75608 230 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 RGS20O76081 388 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 HOXC6P09630 235 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 SRGAP2CP0DJJ0 459 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 SRGAP2BP0DMP2 458 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 ICAM3P32942 547 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 GPD2P43304 727 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 PSMD8P48556 350 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 RPL10AP62906 217 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TUBA4AP68366 448 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TXNL4AP83876 142 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TARBP2Q15633 366 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 ZNF423Q2M1K9 1284 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 EMC1Q8N766 993 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 KBTBD7Q8WVZ9 684 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 SREK1Q8WXA9 508 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 GLIS2Q9BZE0 524 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 ZNF701M0R085 212 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 MSCO60682 206 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TRMUO75648 421 aaKnown RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 TNNC2P02585 160 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 EDN1P05305 212 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 ZNF23P17027 643 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 NRLP54845 237 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 ACBD5Q5T8D3 534 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-205ENST00000467213 KYQ8NBH2 561 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 PCDH18Q9HCL0 1135 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 XPNPEP3Q9NQH7 507 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 PNPOQ9NVS9 261 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 MID2Q9UJV3 735 aa15.99■□□□□ 0.15
CHD1L-205ENST00000467213 HACD1B0YJ81 288 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 TADA2AO75478 443 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 VDRP11473 427 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 GARSP41250 739 aaKnown RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 ALDH3B2P48448 385 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 PTPN11Q06124 597 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 LRRC8BQ6P9F7 803 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 C10orf107Q8IVU9 208 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 PGAM4Q8N0Y7 254 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 TMEM143Q96AN5 459 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 QKIQ96PU8 341 aaKnown RBP eCLIP15.98■□□□□ 0.155e-7■■□□□ 13.1
CHD1L-205ENST00000467213 FERMT1Q9BQL6 677 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 ZNF385DQ9H6B1 395 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 CEPT1Q9Y6K0 416 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 TPP1O14773 563 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 GAS2O43903 313 aaKnown RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 ONECUT3O60422 494 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 PFDN1O60925 122 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 BCAS2O75934 225 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 PGAM1P18669 254 aa15.98■□□□□ 0.15
CHD1L-205ENST00000467213 CDH2P19022 906 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 CDK9P50750 372 aaKnown RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 ADARP55265 1226 aaKnown RBP15.98■□□□□ 0.15
CHD1L-205ENST00000467213 ZNF394Q53GI3 561 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms