RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 P2RY11Q96G91 374 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 PIWIL1Q96J94 861 aaKnown RBP13.27□□□□□ -0.29
UBR4-210ENST00000466969 OMDQ99983 421 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 MSTO1Q9BUK6 570 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 TMEM245Q9H330 911 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 SYNDIG1Q9H7V2 258 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 EPB41L5Q9HCM4 733 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 NCKIPSDQ9NZQ3 722 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.29
UBR4-210ENST00000466969 A0A1W2PP55 124 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 GABRDO14764 452 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 CPLX1O14810 134 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 HNRNPDLO14979 420 aaKnown RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 RNASEH1O60930 286 aaKnown RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 RNASEH2AO75792 299 aaKnown RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 PENKP01210 267 aaPredicted RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 SPIDRQ14159 915 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 ZXDCQ2QGD7 858 aaPredicted RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 DCAF6Q58WW2 860 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 SNX30Q5VWJ9 437 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 GUSBP11Q6P575 273 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 PRPF39Q86UA1 669 aaKnown RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 ZFAND4Q86XD8 727 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 TOP6BLQ8N6T0 577 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 RBBP8NLQ8NC74 664 aaPredicted RBP13.26□□□□□ -0.29
UBR4-210ENST00000466969 STRADBQ9C0K7 418 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 NEUROG2Q9H2A3 272 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
UBR4-210ENST00000466969 TDRD6O60522 2096 aaKnown RBP13.25□□□□□ -0.29
UBR4-210ENST00000466969 K7ESM1 405 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
UBR4-210ENST00000466969 PIAS2O75928 621 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 OR52Z1P0C646 297 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 CDC25AP30304 524 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 FYB2Q5VWT5 728 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 KLHDC7BQ96G42 594 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 KLF16Q9BXK1 252 aaPredicted RBP13.25□□□□□ -0.29
UBR4-210ENST00000466969 CRTAC1Q9NQ79 661 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 PRDM8Q9NQV8 689 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 KLHL11Q9NVR0 708 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 PISDQ9UG56 409 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 SERGEFQ9UGK8 458 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 SUN2Q9UH99 717 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 FZD4Q9ULV1 537 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 AGAP1Q9UPQ3 857 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 ANKHD1Q8IWZ3 2542 aaKnown RBP13.25□□□□□ -0.29
UBR4-210ENST00000466969 DOCK9Q9BZ29 2069 aa13.25□□□□□ -0.29
UBR4-210ENST00000466969 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.293e-6■□□□□ 10.9
UBR4-210ENST00000466969 ARHGAP10A1A4S6 786 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 TMX2-CTNND1H3BSU7 103 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
UBR4-210ENST00000466969 SCAMP1O15126 338 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 TLR5O60602 858 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
UBR4-210ENST00000466969 ECM1Q16610 540 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
UBR4-210ENST00000466969 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 CPT1CQ8TCG5 803 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 PDCD6IPQ8WUM4 868 aaKnown RBP13.24□□□□□ -0.29
UBR4-210ENST00000466969 RSPH9Q9H1X1 276 aaPredicted RBP13.24□□□□□ -0.29
UBR4-210ENST00000466969 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
UBR4-210ENST00000466969 CCDC168Q8NDH2 2452 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 HIVEP3Q5T1R4 2406 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3DA0A087WVF3 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3IA0A087WXS9 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3EA0A087X179 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3KA0A087X1G2 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 PRAMEF33A0A0G2JMD5 474 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 A0A1W2PQ27 194 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 A0A1W2PQ64 194 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 A0A1W2PQC6 194 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3FA6NER0 549 aaPredicted RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 EFCAB7A8K855 629 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3LB9A6J9 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 H0YCG3 227 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 MID1O15344 667 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 PRAMEF10O60809 474 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 CYBBP04839 570 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 ITGB3P05106 788 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3HP0C7X1 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 PLS3P13797 630 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 HGFP14210 728 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 CPA1P15085 419 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 LMO2P25791 158 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 CHKAP35790 457 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 CCT6AP40227 531 aaKnown RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 ACOT2P49753 483 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 PDX1P52945 283 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 MAPK7Q13164 816 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 SEPT6Q14141 434 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms