RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ZNF280BQ86YH2 543 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ZDHHC17Q8IUH5 632 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ADGRF2Q8IZF7 708 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 MCOLN2Q8IZK6 566 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SCML4Q8N228 414 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 LRRC43Q8N309 656 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PDCL2Q8N4E4 241 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 WDTC1Q8N5D0 677 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ANKRD52Q8NB46 1076 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TRIM58Q8NG06 486 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SLC20A1Q8WUM9 679 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SLC35F5Q8WV83 523 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 RFFLQ8WZ73 363 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TFAP2BQ92481 460 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 CYFIP2Q96F07 1278 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SHDQ96IW2 340 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 FAM84AQ96KN4 292 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 CEP295NLQ96MC4 621 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TWNKQ96RR1 684 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ZSWIM1Q9BR11 485 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 MRPL45Q9BRJ2 306 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 DESI2Q9BSY9 194 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SNX25Q9H3E2 840 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TRIT1Q9H3H1 467 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 CWH43Q9H720 699 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 SMYD3Q9H7B4 428 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 GOLGA2P5Q9HBQ8 144 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 MRPL47Q9HD33 250 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 PNPLA8Q9NP80 782 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TMEM51Q9NW97 253 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TRMT1Q9NXH9 659 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 SUCOQ9UBS9 1254 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 GTF3C4Q9UKN8 822 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS41-211ENST00000466017 PAXBP1Q9Y5B6 917 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 NME7Q9Y5B8 376 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 LTBP2Q14767 1821 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 NCANO14594 1321 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 FNDC1Q4ZHG4 1894 aaPredicted RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 CASTOR2A6NHX0 329 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 OR6C75A6NL08 312 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 SIGLEC16A6NMB1 481 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 H7C4K7 107 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 PSPNO60542 156 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 TADA2AO75478 443 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 C1RP00736 705 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 HPXP02790 462 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 CALB1P05937 261 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 TNNT1P13805 278 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 LAG3P18627 525 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 CD58P19256 250 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 LMO2P25791 158 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 NSFP46459 744 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 OR1G1P47890 313 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 WDR5P61964 334 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 RNASELQ05823 741 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 FPGSQ05932 587 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ACAP1Q15027 740 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 WSCD1Q658N2 575 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 PAQR9Q6ZVX9 377 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ZNF365Q70YC5 407 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 MON1BQ7L1V2 547 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 OSTM1Q86WC4 334 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ERICH1Q86X53 443 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 SYCE1Q8N0S2 351 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 RNF169Q8NCN4 708 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 MSANTD4Q8NCY6 345 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 KIF18AQ8NI77 898 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 CTNNBL1Q8WYA6 563 aaPredicted RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 KCTD13Q8WZ19 329 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 SECISBP2LQ93073 1101 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 FUBP3Q96I24 572 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS41-211ENST00000466017 KIRREL1Q96J84 757 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 NOX5Q96PH1 765 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 PKMYT1Q99640 499 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 NCAPGQ9BPX3 1015 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 PAAF1Q9BRP4 392 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 PDCL3Q9H2J4 239 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 MTIF3Q9H2K0 278 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 CSNK1G1Q9HCP0 422 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ACP6Q9NPH0 428 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 CHST7Q9NS84 486 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 DDX43Q9NXZ2 648 aaKnown RBP5.77□□□□□ -1.49
VPS41-211ENST00000466017 TAS2R14Q9NYV8 317 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ADAM22Q9P0K1 906 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 HSFX1Q9UBD0 423 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 RNF14Q9UBS8 474 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 ADAM28Q9UKQ2 775 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 STRIP2Q9ULQ0 834 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 MAFFQ9ULX9 164 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 JRKLQ9Y4A0 524 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 INSL6Q9Y581 213 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 BACE2Q9Y5Z0 518 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 SCINQ9Y6U3 715 aa5.77□□□□□ -1.49
VPS41-211ENST00000466017 TBKBP1A7MCY6 615 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 CES2O00748 559 aa5.76□□□□□ -1.49
VPS41-211ENST00000466017 XPO1O14980 1071 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms