RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 EDEM1Q92611 657 aa18.47■□□□□ 0.55
COL7A1-205ENST00000465238 TCEAL3Q969E4 200 aa18.47■□□□□ 0.55
COL7A1-205ENST00000465238 FAM149B1Q96BN6 582 aa18.47■□□□□ 0.55
COL7A1-205ENST00000465238 TRIM62Q9BVG3 475 aa18.47■□□□□ 0.55
COL7A1-205ENST00000465238 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
COL7A1-205ENST00000465238 TBC1D3BA6NDS4 549 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 AP5Z1O43299 807 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 TULP3O75386 442 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 ERBB2P04626 1255 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 CYP1A1P04798 512 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-205ENST00000465238 GYPCP04921 128 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 HNRNPLP14866 589 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL7A1-205ENST00000465238 KCNA4P22459 653 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 CASP14P31944 242 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 KLHL30Q0D2K2 578 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 EFEMP1Q12805 493 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 ANO4Q32M45 955 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 PTPN20Q4JDL3 420 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 EFHC1Q5JVL4 640 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
COL7A1-205ENST00000465238 TMEM25Q86YD3 366 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 SYN2Q92777 582 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-205ENST00000465238 WBP2Q969T9 261 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 C18orf8Q96DM3 657 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 SPACA7Q96KW9 195 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 EDEM2Q9BV94 578 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 KLF16Q9BXK1 252 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-205ENST00000465238 TJP2Q9UDY2 1190 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 RASAL2Q9UJF2 1139 aa18.46■□□□□ 0.55
COL7A1-205ENST00000465238 KMT2BQ9UMN6 2715 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 MAP1BP46821 2468 aaKnown RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 PLXND1Q9Y4D7 1925 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 FAM170AA1A519 330 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 CAPN9O14815 690 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 MDM4O15151 490 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 BCKDHBP21953 392 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 P2RY2P41231 377 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 PRKCIP41743 596 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 BYSLQ13895 437 aaKnown RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 TOGARAM2Q6ZUX3 1019 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 CYP2U1Q7Z449 544 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 MIB1Q86YT6 1006 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 ZDHHC17Q8IUH5 632 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 TERB1Q8NA31 727 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 PCDHB18PQ96TA0 734 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 HAUS4Q9H6D7 363 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 MARCH2Q9P0N8 246 aa18.45■□□□□ 0.54
COL7A1-205ENST00000465238 BCCIPQ9P287 314 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 LSM7Q9UK45 103 aaKnown RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 BZW2Q9Y6E2 419 aaKnown RBP18.45■□□□□ 0.54
COL7A1-205ENST00000465238 KHNYNO15037 678 aaKnown RBP18.44■□□□□ 0.54
COL7A1-205ENST00000465238 GREM1O60565 184 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 ADAM23O75077 832 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 SKILP12757 684 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 NCAM1P13591 858 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 NSFP46459 744 aaKnown RBP18.44■□□□□ 0.54
COL7A1-205ENST00000465238 GABRB2P47870 512 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 COG7P83436 770 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 SLC6A3Q01959 620 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
COL7A1-205ENST00000465238 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-205ENST00000465238 FAM183BPQ6ZVS7 135 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 TMC6Q7Z403 805 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 ZNF513Q8N8E2 541 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-205ENST00000465238 ASNSD1Q9NWL6 643 aa18.44■□□□□ 0.54
COL7A1-205ENST00000465238 GON4LQ3T8J9 2241 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 CEP295Q9C0D2 2601 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 SLC12A8A0AV02 714 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 LNP1A1A4G5 178 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 MAP3K13O43283 966 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 GLI1P08151 1106 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 UNGP13051 313 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-205ENST00000465238 DHPSP49366 369 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-205ENST00000465238 ZNF75DP51815 510 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 TDRD12Q587J7 1177 aaKnown RBP18.43■□□□□ 0.54
COL7A1-205ENST00000465238 C10orf76Q5T2E6 689 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 BEND5Q7L4P6 421 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 LPCAT2Q7L5N7 544 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 SLC30A5Q8TAD4 765 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 HMGB4Q8WW32 186 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 XPO6Q96QU8 1125 aaKnown RBP18.43■□□□□ 0.54
COL7A1-205ENST00000465238 POPDC2Q9HBU9 364 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 ZDHHC4Q9NPG8 344 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 MARK1Q9P0L2 795 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 WDR35Q9P2L0 1181 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 SFMBT1Q9UHJ3 866 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 STARD13Q9Y3M8 1113 aa18.43■□□□□ 0.54
COL7A1-205ENST00000465238 TCRBV21S2A2A0A5A6 115 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 CACNG3O60359 315 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 HSF2BPO75031 334 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 KCNK5O95279 499 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 SERPING1P05155 500 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 HMBSP08397 361 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 MMP8P22894 467 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms