RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 HECTD3Q5T447 861 aa9.93□□□□□ -0.82
APP-213ENST00000464867 RINT1Q6NUQ1 792 aa9.93□□□□□ -0.82
APP-213ENST00000464867 TPGS1Q6ZTW0 290 aa9.93□□□□□ -0.82
APP-213ENST00000464867 OXR1Q8N573 874 aa9.93□□□□□ -0.82
APP-213ENST00000464867 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
APP-213ENST00000464867 GALNT6Q8NCL4 622 aa9.93□□□□□ -0.82
APP-213ENST00000464867 CCNL2Q96S94 520 aaPredicted RBP9.93□□□□□ -0.82
APP-213ENST00000464867 PKMYT1Q99640 499 aa9.93□□□□□ -0.82
APP-213ENST00000464867 SEMA3CQ99985 751 aa9.93□□□□□ -0.82
APP-213ENST00000464867 ABCG4Q9H172 646 aa9.93□□□□□ -0.82
APP-213ENST00000464867 LHX5Q9H2C1 402 aa9.93□□□□□ -0.82
APP-213ENST00000464867 TMEM60Q9H2L4 133 aa9.93□□□□□ -0.82
APP-213ENST00000464867 HSPBP1Q9NZL4 362 aa9.93□□□□□ -0.82
APP-213ENST00000464867 THAP10Q9P2Z0 257 aaPredicted RBP9.93□□□□□ -0.82
APP-213ENST00000464867 LSM7Q9UK45 103 aaKnown RBP9.93□□□□□ -0.82
APP-213ENST00000464867 CPSF3Q9UKF6 684 aaKnown RBP9.93□□□□□ -0.82
APP-213ENST00000464867 L1RE1Q9UN81 338 aa9.93□□□□□ -0.82
APP-213ENST00000464867 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
APP-213ENST00000464867 ARID1BQ8NFD5 2236 aaPredicted RBP9.92□□□□□ -0.82
APP-213ENST00000464867 FBN2P35556 2912 aa9.92□□□□□ -0.82
APP-213ENST00000464867 COCHO43405 550 aa9.92□□□□□ -0.82
APP-213ENST00000464867 EPHX1P07099 455 aa9.92□□□□□ -0.82
APP-213ENST00000464867 SCP2P22307 547 aa9.92□□□□□ -0.82
APP-213ENST00000464867 EPHA8P29322 1005 aaPredicted RBP9.92□□□□□ -0.82
APP-213ENST00000464867 CDC25AP30304 524 aa9.92□□□□□ -0.82
APP-213ENST00000464867 LINC00303Q3SY05 128 aa9.92□□□□□ -0.82
APP-213ENST00000464867 SLC45A4Q5BKX6 768 aa9.92□□□□□ -0.82
APP-213ENST00000464867 FAM171BQ6P995 826 aa9.92□□□□□ -0.82
APP-213ENST00000464867 NT5DC4Q86YG4 428 aa9.92□□□□□ -0.82
APP-213ENST00000464867 ADGRF2Q8IZF7 708 aa9.92□□□□□ -0.82
APP-213ENST00000464867 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
APP-213ENST00000464867 RUSC1Q9BVN2 902 aa9.92□□□□□ -0.82
APP-213ENST00000464867 RAB34Q9BZG1 259 aa9.92□□□□□ -0.82
APP-213ENST00000464867 SGK2Q9HBY8 427 aa9.92□□□□□ -0.82
APP-213ENST00000464867 ASCL3Q9NQ33 180 aa9.92□□□□□ -0.82
APP-213ENST00000464867 AASDHPPTQ9NRN7 309 aa9.92□□□□□ -0.82
APP-213ENST00000464867 ZNF358Q9NW07 568 aa9.92□□□□□ -0.82
APP-213ENST00000464867 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
APP-213ENST00000464867 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
APP-213ENST00000464867 LRWD1Q9UFC0 647 aa9.92□□□□□ -0.82
APP-213ENST00000464867 PCDHGC4Q9Y5F7 938 aa9.92□□□□□ -0.82
APP-213ENST00000464867 SNX14Q9Y5W7 946 aa9.92□□□□□ -0.82
APP-213ENST00000464867 CKAP5Q14008 2032 aa9.92□□□□□ -0.82
APP-213ENST00000464867 A0A0B4J269 797 aa9.91□□□□□ -0.82
APP-213ENST00000464867 A0A1W2PNR3 127 aa9.91□□□□□ -0.82
APP-213ENST00000464867 E9PMD0 336 aa9.91□□□□□ -0.82
APP-213ENST00000464867 F8VP50 259 aa9.91□□□□□ -0.82
APP-213ENST00000464867 FAM189A1O60320 539 aa9.91□□□□□ -0.82
APP-213ENST00000464867 CSO75390 466 aaKnown RBP9.91□□□□□ -0.82
APP-213ENST00000464867 RTN3O95197 1032 aaPredicted RBP9.91□□□□□ -0.82
APP-213ENST00000464867 DNTTP04053 509 aa9.91□□□□□ -0.82
APP-213ENST00000464867 CISD3P0C7P0 127 aa9.91□□□□□ -0.82
APP-213ENST00000464867 FAM87AP0C7U9 286 aa9.91□□□□□ -0.82
APP-213ENST00000464867 ITGB6P18564 788 aa9.91□□□□□ -0.82
APP-213ENST00000464867 GUCY2CP25092 1073 aa9.91□□□□□ -0.82
APP-213ENST00000464867 YWHAQP27348 245 aa9.91□□□□□ -0.82
APP-213ENST00000464867 CD38P28907 300 aa9.91□□□□□ -0.82
APP-213ENST00000464867 ACOT2P49753 483 aa9.91□□□□□ -0.82
APP-213ENST00000464867 COPAP53621 1224 aa9.91□□□□□ -0.82
APP-213ENST00000464867 RAD51AP2Q09MP3 1159 aa9.91□□□□□ -0.82
APP-213ENST00000464867 MAPK7Q13164 816 aa9.91□□□□□ -0.82
APP-213ENST00000464867 TRIM29Q14134 588 aa9.91□□□□□ -0.82
APP-213ENST00000464867 ECM1Q16610 540 aa9.91□□□□□ -0.82
APP-213ENST00000464867 TTC31Q49AM3 519 aaPredicted RBP9.91□□□□□ -0.82
APP-213ENST00000464867 IGF2-ASQ6U949 168 aa9.91□□□□□ -0.82
APP-213ENST00000464867 SERPINA13PQ6UXR4 307 aa9.91□□□□□ -0.82
APP-213ENST00000464867 C1orf186Q6ZWK4 172 aa9.91□□□□□ -0.82
APP-213ENST00000464867 NLRP8Q86W28 1048 aa9.91□□□□□ -0.82
APP-213ENST00000464867 TOP6BLQ8N6T0 577 aa9.91□□□□□ -0.82
APP-213ENST00000464867 OR2T3Q8NH03 318 aa9.91□□□□□ -0.82
APP-213ENST00000464867 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
APP-213ENST00000464867 CACTINQ8WUQ7 758 aaKnown RBP9.91□□□□□ -0.82
APP-213ENST00000464867 OVCA2Q8WZ82 227 aa9.91□□□□□ -0.82
APP-213ENST00000464867 EXTL1Q92935 676 aa9.91□□□□□ -0.82
APP-213ENST00000464867 TNFRSF25Q93038 417 aa9.91□□□□□ -0.82
APP-213ENST00000464867 HPS3Q969F9 1004 aa9.91□□□□□ -0.82
APP-213ENST00000464867 FBXO32Q969P5 355 aa9.91□□□□□ -0.82
APP-213ENST00000464867 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
APP-213ENST00000464867 SGF29Q96ES7 293 aa9.91□□□□□ -0.82
APP-213ENST00000464867 C8orf48Q96LL4 319 aa9.91□□□□□ -0.82
APP-213ENST00000464867 UCN2Q96RP3 112 aa9.91□□□□□ -0.82
APP-213ENST00000464867 SYT15Q9BQS2 421 aa9.91□□□□□ -0.82
APP-213ENST00000464867 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
APP-213ENST00000464867 AGAP1Q9UPQ3 857 aa9.91□□□□□ -0.82
APP-213ENST00000464867 NCKAP1Q9Y2A7 1128 aa9.91□□□□□ -0.82
APP-213ENST00000464867 SNX9Q9Y5X1 595 aa9.91□□□□□ -0.82
APP-213ENST00000464867 POLQO75417 2590 aa9.9□□□□□ -0.82
APP-213ENST00000464867 PLXNA2O75051 1894 aa9.9□□□□□ -0.82
APP-213ENST00000464867 A0A1W2PPC4 97 aa9.9□□□□□ -0.82
APP-213ENST00000464867 CLEC18AA5D8T8 446 aa9.9□□□□□ -0.82
APP-213ENST00000464867 FAM47DPA6NHR8 397 aa9.9□□□□□ -0.82
APP-213ENST00000464867 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
APP-213ENST00000464867 ATP2C2O75185 946 aa9.9□□□□□ -0.82
APP-213ENST00000464867 IL18RAPO95256 599 aa9.9□□□□□ -0.82
APP-213ENST00000464867 ACO1P21399 889 aaKnown RBP9.9□□□□□ -0.82
APP-213ENST00000464867 POLR2BP30876 1174 aaKnown RBP9.9□□□□□ -0.82
APP-213ENST00000464867 TUBP50607 506 aa9.9□□□□□ -0.82
APP-213ENST00000464867 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.82
APP-213ENST00000464867 ZBTB16Q05516 673 aa9.9□□□□□ -0.82
APP-213ENST00000464867 SFSWAPQ12872 951 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms