RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 KANSL3Q9P2N6 904 aa12.53□□□□□ -0.4
SEC61A1-203ENST00000464451 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.4
SEC61A1-203ENST00000464451 KCNN4O15554 427 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 TYROBPO43914 113 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 LPXNO60711 386 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 SPAG6O75602 509 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 GABBR2O75899 941 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 FGF18O76093 207 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 ITGB1P05556 798 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 THP07101 528 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 GALTP07902 379 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 KCNE1P15382 129 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 CA4P22748 312 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 IGFBP6P24592 240 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 DNAJB1P25685 340 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 FOXN2P32314 431 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 GBP2P32456 591 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 MSH2P43246 934 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 ACADSBP45954 432 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 SF3A3Q12874 501 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 XRCC4Q13426 336 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 ZKSCAN8Q15776 578 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 XKR4Q5GH76 650 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 CENPIQ92674 756 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 MRRFQ96E11 262 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 CYTH2Q99418 400 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 PAFAH2Q99487 392 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 B3GNT5Q9BYG0 378 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 PITPNM3Q9BZ71 974 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 GPATCH2LQ9NWQ4 482 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 PRKAG3Q9UGI9 489 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 HEY1Q9Y5J3 304 aa12.52□□□□□ -0.41
SEC61A1-203ENST00000464451 RALGAPA2Q2PPJ7 1873 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 H3BNC9 293 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 NRP1O14786 923 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 INPPL1O15357 1258 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ZWINTO95229 277 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ZBED1O96006 694 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ALDH2P05091 517 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ZFXP17010 805 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 KRT4P19013 534 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 NRLP54845 237 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 GRIK3Q13003 919 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 C4orf22Q6V702 233 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ALKBH8Q96BT7 664 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SAMD11Q96NU1 681 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 KLC2Q9H0B6 622 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 RAB6BQ9NRW1 208 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ABCF3Q9NUQ8 709 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 KLHL14Q9P2G3 628 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 A0A1W2PPM1 405 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 PDGFRBP09619 1106 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 CCDC130P13994 396 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 FOSL2P15408 326 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ADORA2BP29275 332 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 ELK3P41970 407 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 NR2C2P49116 596 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 TAF6P49848 677 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 DSC1Q08554 894 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 CCDC85BQ15834 202 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 PDK4Q16654 411 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 CA9Q16790 459 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SV2CQ496J9 727 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 CDKL3Q8IVW4 592 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SLC39A11Q8N1S5 342 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 POF1BQ8WVV4 589 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 PPP1R10Q96QC0 940 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 SPG21Q9NZD8 308 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
SEC61A1-203ENST00000464451 EYSQ5T1H1 3165 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms