RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SYCP2LQ5T4T6 812 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 GJB7Q6PEY0 223 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 SERPINA13PQ6UXR4 307 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 ENOSF1Q7L5Y1 443 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 KIAA0907Q7Z7F0 614 aaPredicted RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 ADIPOR2Q86V24 386 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 DQX1Q8TE96 717 aaKnown RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 STK32AQ8WU08 396 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 CYB5D2Q8WUJ1 264 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 PRCCQ92733 491 aaPredicted RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 FOXJ1Q92949 421 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 FAM149B1Q96BN6 582 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 SLC4A5Q9BY07 1137 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 IRX2Q9BZI1 471 aaPredicted RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 CAPN10Q9HC96 672 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 ACP6Q9NPH0 428 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 USP36Q9P275 1121 aaKnown RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 GGA2Q9UJY4 613 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 ANGPTL2Q9UKU9 493 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 KCNJ18B7U540 433 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 SART1O43290 800 aaKnown RBP19.6■□□□□ 0.73
SF3A1-205ENST00000463818 MED7O43513 233 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 PABPC1P11940 636 aaKnown RBP19.6■□□□□ 0.73
SF3A1-205ENST00000463818 MAOBP27338 520 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 ATXN3P54252 364 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-205ENST00000463818 ARHGAP44Q17R89 818 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 MPP7Q5T2T1 576 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 NADSYN1Q6IA69 706 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 GBP6Q6ZN66 633 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 RABEPKQ7Z6M1 372 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 IRF2BP1Q8IU81 584 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 FCRL2Q96LA5 508 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-205ENST00000463818 SERPINB11Q96P15 392 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 GTPBP2Q9BX10 602 aaKnown RBP19.6■□□□□ 0.73
SF3A1-205ENST00000463818 GPR174Q9BXC1 333 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 STIM2Q9P246 746 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 CYTH4Q9UIA0 394 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 ACACBO00763 2458 aa19.6■□□□□ 0.73
SF3A1-205ENST00000463818 IRAK2O43187 625 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 THAP12O43422 761 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 CEACAM1P13688 526 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 OXTRP30559 389 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 GNA15P30679 374 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 CD70P32970 193 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 USP8P40818 1118 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 TPMTP51580 245 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 APBA1Q02410 837 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 MEA1Q16626 185 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 FNDC3BQ53EP0 1204 aaKnown RBP19.59■□□□□ 0.73
SF3A1-205ENST00000463818 WDR45BQ5MNZ6 344 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 SYPL2Q5VXT5 272 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 MBLAC2Q68D91 279 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 TRIM65Q6PJ69 517 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 TMEM110Q86TL2 294 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 AHI1Q8N157 1196 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 ADAM32Q8TC27 787 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 WFDC5Q8TCV5 224 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 SLC39A13Q96H72 371 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 FAM81BQ96LP2 452 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 DDX50Q9BQ39 737 aaKnown RBP19.59■□□□□ 0.73
SF3A1-205ENST00000463818 TMEM245Q9H330 911 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 TLR6Q9Y2C9 796 aa19.59■□□□□ 0.73
SF3A1-205ENST00000463818 ARHGAP33O14559 1287 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 CAPN9O14815 690 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 PAPSS1O43252 624 aaPredicted RBP19.58■□□□□ 0.72
SF3A1-205ENST00000463818 ACADMP11310 421 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 POLR2EP19388 210 aaKnown RBP19.58■□□□□ 0.72
SF3A1-205ENST00000463818 CAMK2GQ13555 558 aaPredicted RBP19.58■□□□□ 0.72
SF3A1-205ENST00000463818 PTPRNQ16849 979 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 BEND5Q7L4P6 421 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 ZNF366Q8N895 744 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 MLKLQ8NB16 471 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 DEFB124Q8NES8 71 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 OR2T3Q8NH03 318 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 MYEOVQ96EZ4 313 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 NUP58Q9BVL2 599 aa19.58■□□□□ 0.72
SF3A1-205ENST00000463818 BECN2A8MW95 431 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 E5RJQ4 531 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 ATP5BP06576 529 aaKnown RBP19.57■□□□□ 0.72
SF3A1-205ENST00000463818 DLDP09622 509 aaKnown RBP19.57■□□□□ 0.72
SF3A1-205ENST00000463818 MTIF2P46199 727 aaKnown RBP19.57■□□□□ 0.72
SF3A1-205ENST00000463818 SHC2P98077 582 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 ZNF252P-AS1Q0IIN9 211 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 NNTQ13423 1086 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 EXOC3L4Q17RC7 722 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 PLEKHG6Q3KR16 790 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 TAC4Q86UU9 113 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 CACUL1Q86Y37 369 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 MFN1Q8IWA4 741 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 HDDC3Q8N4P3 179 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 HJURPQ8NCD3 748 aaPredicted RBP19.57■□□□□ 0.72
SF3A1-205ENST00000463818 CADM4Q8NFZ8 388 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 FIBINQ8TAL6 211 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 LMLNQ96KR4 655 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 APEX2Q9UBZ4 518 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 SUSD2Q9UGT4 822 aa19.57■□□□□ 0.72
SF3A1-205ENST00000463818 LAMA1P25391 3075 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 OPHN1O60890 802 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms