RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 KIAA0907Q7Z7F0 614 aaPredicted RBP12.19□□□□□ -0.46
PCCB-203ENST00000462542 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 EID2Q8N6I1 236 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 RFFLQ8WZ73 363 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 PLD4Q96BZ4 506 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 DUSP16Q9BY84 665 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 GDF3Q9NR23 364 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 MARCH2Q9P0N8 246 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
PCCB-203ENST00000462542 NAV2Q8IVL1 2488 aa12.19□□□□□ -0.46
PCCB-203ENST00000462542 SLC12A8A0AV02 714 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 IKBKBO14920 756 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 BRINP1O60477 761 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 RNASEH1O60930 286 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 DLDP09622 509 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 CKMT2P17540 419 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CD38P28907 300 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 HLA-FP30511 346 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 HARS2P49590 506 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 GALCP54803 685 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 E2F1Q01094 437 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CEBPZQ03701 1054 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 KNOP1Q1ED39 458 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 TBC1D25Q3MII6 688 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 ZACNQ401N2 412 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 PRAMEF14Q5SWL7 426 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 BROXQ5VW32 411 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 PCSK4Q6UW60 755 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 ADIPOR2Q86V24 386 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 SPACA3Q8IXA5 215 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 AHI1Q8N157 1196 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 OXR1Q8N573 874 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCCB-203ENST00000462542 ZNF248Q8NDW4 579 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 PLEKHO2Q8TD55 490 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 GANCQ8TET4 914 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CYB5D2Q8WUJ1 264 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 TMA16Q96EY4 203 aaKnown RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 C7orf25Q9BPX7 421 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 RSPH9Q9H1X1 276 aaPredicted RBP12.18□□□□□ -0.46
PCCB-203ENST00000462542 CLMPQ9H6B4 373 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 ERVMER34-1Q9H9K5 563 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 CLCA2Q9UQC9 943 aa12.18□□□□□ -0.46
PCCB-203ENST00000462542 MYLKQ15746 1914 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 MYO18BQ8IUG5 2567 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 LRRC72A6NJI9 287 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 KIF20AO95235 890 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 SLFN14P0C7P3 912 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 POLR2EP19388 210 aaKnown RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 GLDCP23378 1020 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 RXRGP48443 463 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 CCR5P51681 352 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 KCNC4Q03721 635 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 KCNH2Q12809 1159 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 SHBQ15464 509 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 TRIP4Q15650 581 aaPredicted RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 PKDCCQ504Y2 493 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 SLC45A4Q5BKX6 768 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 CHST9Q7L1S5 443 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 LSMEM2Q8N112 164 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 ZNF557Q8N988 423 aaPredicted RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 LGMNQ99538 433 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 PABPC3Q9H361 631 aaKnown RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 OLA1Q9NTK5 396 aaKnown RBP12.17□□□□□ -0.46
PCCB-203ENST00000462542 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 GGA2Q9UJY4 613 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 STOML2Q9UJZ1 356 aa12.17□□□□□ -0.46
PCCB-203ENST00000462542 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 B8ZZF3 427 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 TLR4O00206 839 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 CBX4O00257 560 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 LATS1O95835 1130 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 PABPC1P11940 636 aaKnown RBP12.16□□□□□ -0.46
PCCB-203ENST00000462542 EPHA8P29322 1005 aaPredicted RBP12.16□□□□□ -0.46
PCCB-203ENST00000462542 ASPAP45381 313 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 CLDN6P56747 220 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 EHHADHQ08426 723 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 E2F4Q16254 413 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 MPP7Q5T2T1 576 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 ADGRF1Q5T601 910 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 MBLAC2Q68D91 279 aa12.16□□□□□ -0.46
PCCB-203ENST00000462542 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms