RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.04
SMPD4-216ENST00000461187 TRIM16O95361 564 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 LATS1O95835 1130 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 C7P10643 843 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 HLA-EP13747 358 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 FMO5P49326 533 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 DAOAP59103 153 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ZNF445P59923 1031 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ARID5AQ03989 594 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 CAMK2GQ13555 558 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ADGRF1Q5T601 910 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 MSANTD2Q6P1R3 559 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 KIAA0907Q7Z7F0 614 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-216ENST00000461187 CACUL1Q86Y37 369 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ZCCHC9Q8N567 271 aaKnown RBP15.33■□□□□ 0.04
SMPD4-216ENST00000461187 SLC35F5Q8WV83 523 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 TMA16Q96EY4 203 aaKnown RBP15.33■□□□□ 0.04
SMPD4-216ENST00000461187 NUP58Q9BVL2 599 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ZDHHC5Q9C0B5 715 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 TMEM245Q9H330 911 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 MYLKQ15746 1914 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 ARID1BQ8NFD5 2236 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-216ENST00000461187 FAM221BA6H8Z2 402 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 RNF225M0QZC1 329 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-216ENST00000461187 SMC2O95347 1197 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 IGLV3-27P01718 113 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 PAEPP09466 180 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 ACADMP11310 421 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 LCP1P13796 627 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 RGS7P49802 495 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 SGSHP51688 502 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 TRIP6Q15654 476 aaKnown RBP15.32■□□□□ 0.04
SMPD4-216ENST00000461187 ZNF423Q2M1K9 1284 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 PMF1Q6P1K2 205 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 TMEM270Q6UE05 265 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 CHST9Q7L1S5 443 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 RAB44Q7Z6P3 723 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-216ENST00000461187 ADIPOR2Q86V24 386 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 NAXDQ8IW45 347 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 CHCHD4Q8N4Q1 142 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMPD4-216ENST00000461187 OR2T3Q8NH03 318 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 C1orf216Q8TAB5 229 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 WFIKKN2Q8TEU8 576 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 CYB5D2Q8WUJ1 264 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 SMARCE1Q969G3 411 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 ZSWIM1Q9BR11 485 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 MIR1-1HGQ9H1L0 117 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 ABCB8Q9NUT2 735 aa15.32■□□□□ 0.04
SMPD4-216ENST00000461187 PIK3R2O00459 728 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 PMM2O15305 246 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 BCAT2O15382 392 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 RDXP35241 583 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 BNC1Q01954 994 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 CNGA2Q16280 664 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 PTPRNQ16849 979 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 FNDC3BQ53EP0 1204 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 RFWD3Q6PCD5 774 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 FAM124AQ86V42 546 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 ZNF366Q8N895 744 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 ZCCHC14Q8WYQ9 949 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 IRGQQ8WZA9 623 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 KAT5Q92993 513 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 NT5C1BQ96P26 610 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 IL21RQ9HBE5 538 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 EIF2B4Q9UI10 523 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 GGA2Q9UJY4 613 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 PLA2G4CQ9UP65 541 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 PCDHB4Q9Y5E5 795 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 TDRD6O60522 2096 aaKnown RBP15.31■□□□□ 0.04
SMPD4-216ENST00000461187 APC2O95996 2303 aa15.31■□□□□ 0.04
SMPD4-216ENST00000461187 GOLGA6L7A0A1B0GV03 622 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 SRRM3A6NNA2 597 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 CBFA2T3O75081 653 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 CALCAP01258 141 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 PABPC1P11940 636 aaKnown RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 SLC6A4P31645 630 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 ACSL1P33121 698 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 FAM133BQ5BKY9 247 aaKnown RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 PIK3R6Q5UE93 754 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 MBLAC2Q68D91 279 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 ISM2Q6H9L7 571 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 AHI1Q8N157 1196 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 CLEC4CQ8WTT0 213 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 CEP63Q96MT8 703 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 TIGD1Q96MW7 591 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 IRX2Q9BZI1 471 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 PCED1AQ9H1Q7 454 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 LHX5Q9H2C1 402 aa15.3■□□□□ 0.04
SMPD4-216ENST00000461187 C6orf106Q9H6K1 298 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-216ENST00000461187 GAREM1Q9H706 876 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms