RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 TMEM245Q9H330 911 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CLIC5Q9NZA1 410 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 AGO1Q9UL18 857 aaKnown RBP18.02■□□□□ 0.48
TOP3A-202ENST00000461127 A0A1W2PPC4 97 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 HHLA1C9JL84 531 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 ARHGAP6O43182 974 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 C7P10643 843 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 ARRB1P49407 418 aaPredicted RBP18.01■□□□□ 0.47
TOP3A-202ENST00000461127 UCNP55089 124 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 KCNC4Q03721 635 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 PDE4CQ08493 712 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 EFEMP1Q12805 493 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 SFSWAPQ12872 951 aaKnown RBP18.01■□□□□ 0.47
TOP3A-202ENST00000461127 PRAMEF14Q5SWL7 426 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 CCDC186Q7Z3E2 898 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 CACTIN-AS1Q8N1I8 211 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF507Q8TCN5 953 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 SAP25Q8TEE9 199 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 GANCQ8TET4 914 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 HPS3Q969F9 1004 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 USP28Q96RU2 1077 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 HNRNPABQ99729 332 aaKnown RBP18.01■□□□□ 0.47
TOP3A-202ENST00000461127 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
TOP3A-202ENST00000461127 GDF3Q9NR23 364 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 STRIP2Q9ULQ0 834 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 CLEC4EQ9ULY5 219 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 CLCA2Q9UQC9 943 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
TOP3A-202ENST00000461127 FAM47DPA6NHR8 397 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 TGFB1I1O43294 461 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 GLDCP23378 1020 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 KIF11P52732 1056 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 TMPRSS3P57727 454 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 STK38Q15208 465 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 MPPE1Q53F39 396 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF776Q68DI1 518 aaPredicted RBP18■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF366Q8N895 744 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF248Q8NDW4 579 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 CYB5D2Q8WUJ1 264 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 TSC1Q92574 1164 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 SPATA32Q96LK8 384 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 SLC6A18Q96N87 628 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 ORAI3Q9BRQ5 295 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 PRSS16Q9NQE7 514 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 AASDHPPTQ9NRN7 309 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 SUN2Q9UH99 717 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 SCML1Q9UN30 329 aa18■□□□□ 0.47
TOP3A-202ENST00000461127 UBE4BO95155 1302 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 EXOC3O60645 756 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 IGHV4-34P06331 123 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 CD38P28907 300 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 SGSM1Q2NKQ1 1148 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 USP30Q70CQ3 517 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 CHST9Q7L1S5 443 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 RSRC2Q7L4I2 434 aaKnown RBP17.99■□□□□ 0.47
TOP3A-202ENST00000461127 EPM2AIP1Q7L775 607 aaPredicted RBP17.99■□□□□ 0.47
TOP3A-202ENST00000461127 SCD5Q86SK9 330 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 DNAI2Q9GZS0 605 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
TOP3A-202ENST00000461127 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 MARCH2Q9P0N8 246 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
TOP3A-202ENST00000461127 HMGXB4Q9UGU5 601 aa17.99■□□□□ 0.47
TOP3A-202ENST00000461127 B8ZZF3 427 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 KIF20AO95235 890 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 ATP5BP06576 529 aaKnown RBP17.98■□□□□ 0.47
TOP3A-202ENST00000461127 EPHA8P29322 1005 aaPredicted RBP17.98■□□□□ 0.47
TOP3A-202ENST00000461127 CASP4P49662 377 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 PCBP4P57723 403 aaKnown RBP17.98■□□□□ 0.47
TOP3A-202ENST00000461127 SLC45A4Q5BKX6 768 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 FAM26FQ5R3K3 315 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 NELFCDQ8IXH7 590 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 AHI1Q8N157 1196 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 ARHGAP18Q8N392 663 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 OXR1Q8N573 874 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 FAM181AQ8N9Y4 354 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 FBXL12Q9NXK8 326 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 PLXNA2O75051 1894 aa17.98■□□□□ 0.47
TOP3A-202ENST00000461127 SLC12A8A0AV02 714 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 LRRC72A6NJI9 287 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 RNASEH1O60930 286 aaKnown RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 YEATS4O95619 227 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 RPN1P04843 607 aaKnown RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 CKMT2P17540 419 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 HOXD9P28356 352 aaPredicted RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 HLA-FP30511 346 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 NASPP49321 788 aaPredicted RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF445P59923 1031 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 ASIC1P78348 528 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 AMPD3Q01432 767 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 SHBQ15464 509 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 PKDCCQ504Y2 493 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 PDILTQ8N807 584 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 RFFLQ8WZ73 363 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 TAF4BQ92750 862 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms