RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 OPHN1O60890 802 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SGPL1O95470 568 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 GGPS1O95749 300 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CCNE2O96020 404 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ALDH2P05091 517 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ZNF286BP0CG31 522 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SYT1P21579 422 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 UBA1P22314 1058 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ACRV1P26436 265 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SREBF1P36956 1147 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CEBPZQ03701 1054 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ADRM1Q16186 407 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 TBR1Q16650 682 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 LETM2Q2VYF4 491 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 HSDL1Q3SXM5 330 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 C4orf46Q504U0 113 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 KANK2Q63ZY3 851 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 TMEM200BQ69YZ2 307 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 LRSAM1Q6UWE0 723 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CXCL17Q6UXB2 119 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 USP30Q70CQ3 517 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 LARP4Q71RC2 724 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 TRMT1LQ7Z2T5 733 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 PLA2G4DQ86XP0 818 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 KIAA0319LQ8IZA0 1049 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CDYL2Q8N8U2 506 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CCDC148Q8NFR7 591 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 OR6J1Q8NGC5 347 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 PAWRQ96IZ0 340 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 INPP4AQ96PE3 977 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 OR14A2Q96R54 314 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 MXRA8Q9BRK3 442 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ABHD16BQ9H3Z7 469 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 NLRC4Q9NPP4 1024 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 XPNPEP3Q9NQH7 507 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SH3GLB2Q9NR46 395 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 EVLQ9UI08 416 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM184BQ9ULE4 1060 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 L1RE1Q9UN81 338 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 MTMR6Q9Y217 621 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 JRKLQ9Y4A0 524 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 PCDHB6Q9Y5E3 794 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 A0A0A6YYJ9 748 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GSTTP1A0A1W2PQM5 241 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 TMEM150BA6NC51 233 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 H3BQV1 296 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 hCG_1984214I3L0E3 225 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 CCNT1O60563 726 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 PQBP1O60828 265 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 MAFO75444 373 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 ZNF202O95125 648 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GJB1P08034 283 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 RARBP10826 455 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 AKR1A1P14550 325 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 KCNA2P16389 499 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 APEX1P27695 318 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 HTR1BP28222 390 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GNA11P29992 359 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 MCM7P33993 719 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 USP8P40818 1118 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 WASP42768 502 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 MAGEA8P43361 318 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GPR15P49685 360 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 MCM2P49736 904 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 KCNQ1P51787 676 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 KRTAP1-1Q07627 177 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 RESTQ13127 1097 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 SEMA5AQ13591 1074 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 TRIM29Q14134 588 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 NONOQ15233 471 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 IL17AQ16552 155 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 ZSCAN26Q16670 478 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GRAMD1BQ3KR37 738 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 C3orf36Q3SXR2 165 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 CEP55Q53EZ4 464 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 IGFL4Q6B9Z1 124 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 DARS2Q6PI48 645 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 NPNTQ6UXI9 565 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GAREM2Q75VX8 874 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 SRLQ86TD4 932 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 TLK2Q86UE8 772 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM186BQ8IYM0 893 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 ZNF713Q8N859 430 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 WDR48Q8TAF3 677 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 RIN2Q8WYP3 895 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 HAS1Q92839 578 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 HDAC10Q969S8 669 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 IWS1Q96ST2 819 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 PCYT2Q99447 389 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 SH2D3AQ9BRG2 576 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 LRFN3Q9BTN0 628 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 C1QTNF1Q9BXJ1 281 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 B3GNT5Q9BYG0 378 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 PITHD1Q9GZP4 211 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 OR10A2Q9H208 303 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 BHMT2Q9H2M3 363 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 NELFAQ9H3P2 528 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 AGO4Q9HCK5 861 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms