RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ECHS1P30084 290 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 TPI1P60174 286 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 EIF3EP60228 445 aaKnown RBP17.41■□□□□ 0.38
NELFCD-201ENST00000460601 ERVK-21P61565 698 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 UBE3AQ05086 875 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 NOMO1Q15155 1222 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 PIK3R6Q5UE93 754 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 CCNI2Q6ZMN8 369 aaPredicted RBP17.41■□□□□ 0.38
NELFCD-201ENST00000460601 GAREM2Q75VX8 874 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 GSTA5Q7RTV2 222 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 VSIG1Q86XK7 387 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 GDPD5Q8WTR4 605 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 ZBTB9Q96C00 473 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 NACA2Q9H009 215 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 IL21Q9HBE4 155 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 MAN1C1Q9NR34 630 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 TRPM5Q9NZQ8 1165 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 NEU2Q9Y3R4 380 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 HS3ST4Q9Y661 456 aa17.41■□□□□ 0.38
NELFCD-201ENST00000460601 PDE4DIPQ5VU43 2346 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 H3BNC9 293 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 H3BRJ5 948 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 SCAMP3O14828 347 aaKnown RBP17.4■□□□□ 0.38
NELFCD-201ENST00000460601 RB1P06400 928 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 RBP3P10745 1247 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 EPHB2P29323 1055 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 RPL21P46778 160 aaKnown RBP17.4■□□□□ 0.38
NELFCD-201ENST00000460601 BRMS1LQ5PSV4 323 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 ZNF697Q5TEC3 545 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 SNX30Q5VWJ9 437 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 PPP2R2DQ66LE6 453 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 DUPD1Q68J44 220 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 NPWQ8N729 165 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 SLCO2A1Q92959 643 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
NELFCD-201ENST00000460601 GKN1Q9NS71 199 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 OLA1Q9NTK5 396 aaKnown RBP17.4■□□□□ 0.38
NELFCD-201ENST00000460601 DTLQ9NZJ0 730 aa17.4■□□□□ 0.38
NELFCD-201ENST00000460601 ANAPC1Q9H1A4 1944 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 CCDC151A5D8V7 595 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 ZNF487B1APH4 448 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 BHMG1C9JSJ3 638 aaPredicted RBP17.39■□□□□ 0.38
NELFCD-201ENST00000460601 SGK1O00141 431 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 IFNB1P01574 187 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 FAM153BP0C7A2 387 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 ERCC2P18074 760 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 ATP5C1P36542 298 aaKnown RBP17.39■□□□□ 0.38
NELFCD-201ENST00000460601 CYP4F8P98187 520 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 FAM153CQ494X1 144 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 HECTD3Q5T447 861 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 STXBP5Q5T5C0 1151 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 TXNDC8Q6A555 127 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 RWDD4Q6NW29 188 aaKnown RBP17.39■□□□□ 0.38
NELFCD-201ENST00000460601 DRICH1Q6PGQ1 229 aaPredicted RBP17.39■□□□□ 0.38
NELFCD-201ENST00000460601 C14orf80Q86SX3 495 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 UNC45BQ8IWX7 931 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 IFT20Q8IY31 132 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 PDZD8Q8NEN9 1154 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 ZNF446Q9NWS9 450 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 FAM153AQ9UHL3 310 aa17.39■□□□□ 0.38
NELFCD-201ENST00000460601 RFXAPO00287 272 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 MCF2LO15068 1137 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 DCLK1O15075 740 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 OAS1P00973 400 aaKnown RBP17.39■□□□□ 0.37
NELFCD-201ENST00000460601 F11P03951 625 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TGM2P21980 687 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 GABRR2P28476 465 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 IRAK1P51617 712 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TRIP4Q15650 581 aaPredicted RBP17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TAB3Q8N5C8 712 aaPredicted RBP17.39■□□□□ 0.37
NELFCD-201ENST00000460601 ALLCQ8N6M5 410 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 FAM71DQ8N9W8 422 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TTC13Q8NBP0 860 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 TTC16Q8NEE8 873 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 OVCA2Q8WZ82 227 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 SEC14L1Q92503 715 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 CORO1BQ9BR76 489 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 SMPD4Q9NXE4 827 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 MPP6Q9NZW5 540 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 RCOR3Q9P2K3 495 aaPredicted RBP17.39■□□□□ 0.37
NELFCD-201ENST00000460601 DNMT3LQ9UJW3 386 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
NELFCD-201ENST00000460601 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
NELFCD-201ENST00000460601 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
NELFCD-201ENST00000460601 FAM187AA6NFU0 413 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 CLASP2O75122 1294 aaKnown RBP17.38■□□□□ 0.37
NELFCD-201ENST00000460601 IGLV3-27P01718 113 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 ITGAVP06756 1048 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 ZXDBP98169 803 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
NELFCD-201ENST00000460601 MS4A13Q5J8X5 152 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 CCDC149Q6ZUS6 474 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 WBP2Q969T9 261 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 MYEOVQ96EZ4 313 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 HAPLN3Q96S86 360 aa17.38■□□□□ 0.37
NELFCD-201ENST00000460601 EPAS1Q99814 870 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms