RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MRPS17Q9Y2R5 130 aaKnown RBP23.31■■□□□ 1.32
C9orf3-209ENST00000460573 OTOL1A6NHN0 477 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 EIF3CLB5ME19 914 aaKnown RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 SPECC1L-ADORA2AF8WAN1 911 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 NCAM2O15394 837 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 IPO7O95373 1038 aaKnown RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 TFE3P19532 575 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 GJA4P35212 333 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 NBL1P41271 181 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 LY6G5CQ5SRR4 150 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 EIF3CQ99613 913 aaKnown RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 NCAPGQ9BPX3 1015 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 ADAM33Q9BZ11 813 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 ARHGEF38Q9NXL2 777 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 CALCOCO1Q9P1Z2 691 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 UVRAGQ9P2Y5 699 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 EPN1Q9Y6I3 576 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-209ENST00000460573 COL4A2P08572 1712 aa23.3■■□□□ 1.32
C9orf3-209ENST00000460573 TICRRQ7Z2Z1 1910 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 CYBBP04839 570 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 ADH5P11766 374 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 CTHP32929 405 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 ACAP1Q15027 740 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 CDO1Q16878 200 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 C15orf59Q2T9L4 293 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-209ENST00000460573 ZNF852Q6ZMS4 543 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 TTC8Q8TAM2 541 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 FAM172AQ8WUF8 416 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 NUP85Q9BW27 656 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 SPATA6Q9NWH7 488 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-209ENST00000460573 LCMT1Q9UIC8 334 aa23.29■■□□□ 1.32
C9orf3-209ENST00000460573 SOWAHDA6NJG2 315 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 FAM170BA6NMN3 283 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 HOXC11O43248 304 aaPredicted RBP23.28■■□□□ 1.32
C9orf3-209ENST00000460573 CCP110O43303 1012 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 NDUFA10O95299 355 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 MOCS2O96007 188 aaPredicted RBP23.28■■□□□ 1.32
C9orf3-209ENST00000460573 PSMA2P25787 234 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 EIF2DP41214 584 aaKnown RBP23.28■■□□□ 1.32
C9orf3-209ENST00000460573 MAGEA1P43355 309 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 ARL13BQ3SXY8 428 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 MPPE1Q53F39 396 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 ZC3H14Q6PJT7 736 aaKnown RBP23.28■■□□□ 1.32
C9orf3-209ENST00000460573 TPGS1Q6ZTW0 290 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 TMEM25Q86YD3 366 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 TMEM139Q8IV31 216 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 NELL2Q99435 816 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 TKTL2Q9H0I9 626 aa23.28■■□□□ 1.32
C9orf3-209ENST00000460573 CD72P21854 359 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 ANO4Q32M45 955 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 FAM133BQ5BKY9 247 aaKnown RBP23.27■■□□□ 1.32
C9orf3-209ENST00000460573 C1orf210Q8IVY1 113 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 RHOT2Q8IXI1 618 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 CCDC112Q8NEF3 446 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 FAM3CQ92520 227 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 ARHGEF26Q96DR7 871 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 TMA16Q96EY4 203 aaKnown RBP23.27■■□□□ 1.32
C9orf3-209ENST00000460573 XPO6Q96QU8 1125 aaKnown RBP23.27■■□□□ 1.32
C9orf3-209ENST00000460573 BBS2Q9BXC9 721 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 PACSIN1Q9BY11 444 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 LTB4R2Q9NPC1 389 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 CTTNBP2NLQ9P2B4 639 aa23.27■■□□□ 1.32
C9orf3-209ENST00000460573 TYW5A2RUC4 315 aaKnown RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PROB1E7EW31 1015 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 GFRA2O00451 464 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 TRDMT1O14717 391 aaKnown RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 LAMTOR5O43504 91 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 RNF8O76064 485 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PENKP01210 267 aaPredicted RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 SOX9P48436 509 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 AIF1P55008 147 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 HDAC4P56524 1084 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 OGDHQ02218 1023 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PIGHQ14442 188 aaPredicted RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PREPLQ4J6C6 727 aaPredicted RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 MPP7Q5T2T1 576 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 NADSYN1Q6IA69 706 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 FAM131BQ86XD5 332 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 ZNF564Q8TBZ8 553 aaPredicted RBP23.26■■□□□ 1.31
C9orf3-209ENST00000460573 C1orf74Q96LT6 269 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 HAPLN3Q96S86 360 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 IP6K2Q9UHH9 426 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PCDHA13Q9Y5I0 950 aa23.26■■□□□ 1.31
C9orf3-209ENST00000460573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-209ENST00000460573 NEDD8-MDP1E9PL57 170 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 MYO1FO00160 1098 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 PAGE1O75459 146 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 TYRP14679 529 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 TACR2P21452 398 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 MAGEA9P43362 315 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 ATXN1P54253 815 aaKnown RBP23.25■■□□□ 1.31
C9orf3-209ENST00000460573 TCEAL1Q15170 157 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 GAB4Q2WGN9 574 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 MS4A13Q5J8X5 152 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 PIK3R6Q5UE93 754 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 RAD9BQ6WBX8 426 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 CHSY1Q86X52 802 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 DDI1Q8WTU0 396 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 NTAN1Q96AB6 310 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms