RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 NFE2L3Q9Y4A8 694 aa23.71■■□□□ 1.39
PTPN4-207ENST00000460162 USP24Q9UPU5 2620 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 IGLV3-19P01714 112 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 EPHX1P07099 455 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 TBX4P57082 545 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 NNTQ13423 1086 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 AZIN2Q96A70 460 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 TOE1Q96GM8 510 aaKnown RBP23.7■■□□□ 1.38
PTPN4-207ENST00000460162 SERPINB11Q96P15 392 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 ABCB8Q9NUT2 735 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 GGA2Q9UJY4 613 aa23.7■■□□□ 1.38
PTPN4-207ENST00000460162 UPK3BL1B0FP48 263 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 UPK3BL2E5RIL1 263 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 ACSL4O60488 711 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 CALCAP01258 141 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 PABPC1P11940 636 aaKnown RBP23.69■■□□□ 1.38
PTPN4-207ENST00000460162 KRT5P13647 590 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 GNSP15586 552 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 OXTRP30559 389 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 GPD2P43304 727 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 ACADSBP45954 432 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 TPMTP51580 245 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 ST3GAL2Q16842 350 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 FAM133BQ5BKY9 247 aaKnown RBP23.69■■□□□ 1.38
PTPN4-207ENST00000460162 CHST9Q7L1S5 443 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 ENOSF1Q7L5Y1 443 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 KIAA0907Q7Z7F0 614 aaPredicted RBP23.69■■□□□ 1.38
PTPN4-207ENST00000460162 RGL4Q8IZJ4 473 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 HDDC3Q8N4P3 179 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 DEFB124Q8NES8 71 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 CADM4Q8NFZ8 388 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 TRIM62Q9BVG3 475 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 GTPBP2Q9BX10 602 aaKnown RBP23.69■■□□□ 1.38
PTPN4-207ENST00000460162 MIS12Q9H081 205 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 SLC32A1Q9H598 525 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 FSCN3Q9NQT6 498 aa23.69■■□□□ 1.38
PTPN4-207ENST00000460162 MEI4A8MW99 385 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 KCNJ18B7U540 433 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 ARHGAP33O14559 1287 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 MED7O43513 233 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 SYPP08247 313 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 ACADMP11310 421 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 SGSHP51688 502 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 SEMA3BQ13214 749 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 CAMK2GQ13555 558 aaPredicted RBP23.68■■□□□ 1.38
PTPN4-207ENST00000460162 FNDC3BQ53EP0 1204 aaKnown RBP23.68■■□□□ 1.38
PTPN4-207ENST00000460162 PIK3R6Q5UE93 754 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 BEND5Q7L4P6 421 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 ADIPOR2Q86V24 386 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 MINDY1Q8N5J2 469 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 OR2T3Q8NH03 318 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 DQX1Q8TE96 717 aaKnown RBP23.68■■□□□ 1.38
PTPN4-207ENST00000460162 STK32AQ8WU08 396 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 FAM81BQ96LP2 452 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 DDX50Q9BQ39 737 aaKnown RBP23.68■■□□□ 1.38
PTPN4-207ENST00000460162 TMEM245Q9H330 911 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 FBRSQ9HAH7 460 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 ST7Q9NRC1 585 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 RWDD2AQ9UIY3 292 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 PLA2G4CQ9UP65 541 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 TLR6Q9Y2C9 796 aa23.68■■□□□ 1.38
PTPN4-207ENST00000460162 TYW5A2RUC4 315 aaKnown RBP23.67■■□□□ 1.38
PTPN4-207ENST00000460162 OPHN1O60890 802 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 FYNP06241 537 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 C7P10643 843 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 SLC6A4P31645 630 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 UBE2HP62256 183 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 PLEKHG6Q3KR16 790 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 RFWD3Q6PCD5 774 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 TRIM65Q6PJ69 517 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 HJURPQ8NCD3 748 aaPredicted RBP23.67■■□□□ 1.38
PTPN4-207ENST00000460162 DNASE2BQ8WZ79 361 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 FAM149B1Q96BN6 582 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 FCRL2Q96LA5 508 aaPredicted RBP23.67■■□□□ 1.38
PTPN4-207ENST00000460162 GPR174Q9BXC1 333 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 UBE2TQ9NPD8 197 aaPredicted RBP23.67■■□□□ 1.38
PTPN4-207ENST00000460162 KIAA1468Q9P260 1216 aa23.67■■□□□ 1.38
PTPN4-207ENST00000460162 TBL1XO60907 577 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 ATP5BP06576 529 aaKnown RBP23.66■■□□□ 1.38
PTPN4-207ENST00000460162 DLDP09622 509 aaKnown RBP23.66■■□□□ 1.38
PTPN4-207ENST00000460162 HLA-EP13747 358 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 PTPRNQ16849 979 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 MBLAC2Q68D91 279 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 PIP4P1Q86T03 277 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 CACUL1Q86Y37 369 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 SCUBE3Q8IX30 993 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 WFDC5Q8TCV5 224 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 CYB5D2Q8WUJ1 264 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 PRICKLE1Q96MT3 831 aaPredicted RBP23.66■■□□□ 1.38
PTPN4-207ENST00000460162 PCED1AQ9H1Q7 454 aa23.66■■□□□ 1.38
PTPN4-207ENST00000460162 DNAAF2Q9NVR5 837 aaKnown RBP23.66■■□□□ 1.38
PTPN4-207ENST00000460162 LETM1O95202 739 aaPredicted RBP23.65■■□□□ 1.38
PTPN4-207ENST00000460162 GNA15P30679 374 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 FOXC1Q12948 553 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 NADSYN1Q6IA69 706 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 DENND1BQ6P3S1 775 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 MFN1Q8IWA4 741 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 SLC39A13Q96H72 371 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 NUP58Q9BVL2 599 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 SLC4A5Q9BY07 1137 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms