RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ATP13A4Q4VNC1 1196 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 CFAP58Q5T655 872 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SH3PXD2AQ5TCZ1 1133 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 TTC39BQ5VTQ0 682 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SNX30Q5VWJ9 437 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 DAB2IPQ5VWQ8 1189 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 MSANTD2Q6P1R3 559 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 WDR93Q6P2C0 686 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 DRICH1Q6PGQ1 229 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ARHGEF18Q6ZSZ5 1173 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 RFX8Q6ZV50 586 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 GPRIN1Q7Z2K8 1008 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 HDXQ7Z353 690 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 CROCCP2Q86T23 111 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 RBM23Q86U06 439 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZC3H18Q86VM9 953 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 CHSY1Q86X52 802 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 C12orf50Q8NA57 414 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 GABPB2Q8TAK5 448 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 OLIG1Q8TAK6 271 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 BCL7CQ8WUZ0 217 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 RAPGEF5Q92565 580 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 NDRG1Q92597 394 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 EXOC4Q96A65 974 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 TIFAQ96CG3 184 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SNF8Q96H20 258 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 RPRD1AQ96P16 312 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 VAT1Q99536 393 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 PARD6BQ9BYG5 372 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 FRMD8Q9BZ67 464 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 FOXP3Q9BZS1 431 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 TRIM31Q9BZY9 425 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZYG11BQ9C0D3 744 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 KLC2Q9H0B6 622 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 NKX2-4Q9H2Z4 354 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 IGFLR1Q9H665 355 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 MAN1C1Q9NR34 630 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 PIGVQ9NUD9 493 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 THG1LQ9NWX6 298 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 IL37Q9NZH6 218 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 PAK5Q9P286 719 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 TBC1D14Q9P2M4 693 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ANAPC5Q9UJX4 755 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC8A2Q9UPR5 921 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 COL4A6Q14031 1691 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANAPC1Q9H1A4 1944 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 MYO9BQ13459 2157 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM92AA1XBS5 289 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF840PA6NDX5 716 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 H0Y626 953 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 DFFAO00273 331 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCL16O15467 120 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 KCNN4O15554 427 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 TTI1O43156 1089 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 LIASO43766 372 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 SEC24AO95486 1093 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 LATS1O95835 1130 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 GOT1P17174 413 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATF6P18850 670 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 OR1E1P30953 314 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 NNMTP40261 264 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 NRIP1P48552 1158 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 MARCKSL1P49006 195 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 GPR15P49685 360 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARSEP51690 589 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 CLCN4P51793 760 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 DRG2P55039 364 aaKnown RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 VCPP55072 806 aaKnown RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 MLLT6P55198 1093 aaPredicted RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 GEMIN4P57678 1058 aaKnown RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ERVFC1P60507 584 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 BASP1P80723 227 aaKnown RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 SMAD3P84022 425 aaKnown RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC7A5Q01650 507 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF33AQ06730 810 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ITKQ08881 620 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 IFFO1Q0D2I5 559 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF252P-AS1Q0IIN9 211 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 NR1H3Q13133 447 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 CYP1B1Q16678 543 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 PREPLQ4J6C6 727 aaPredicted RBP6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATAT1Q5SQI0 421 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 C9orf50Q5SZB4 431 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 C6orf118Q5T5N4 469 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 ADGRF1Q5T601 910 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 RASIP1Q5U651 963 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 EMBQ6PCB8 327 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 PID1Q7Z2X4 250 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 TAC4Q86UU9 113 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 JAMLQ86YT9 394 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 DENND1CQ8IV53 801 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 YAF2Q8IY57 180 aa6.02□□□□□ -1.45
RNU1-88P-201ENST00000459274 CNPY4Q8N129 248 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms