RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 OS9Q13438 667 aaPredicted RBP3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 PUM3Q15397 648 aaKnown RBP3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 ETFDHQ16134 617 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 SLC9C1Q4G0N8 1177 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 Q4G0T1 1027 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 RFX6Q8HWS3 928 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 OR4N4Q8N0Y3 316 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 SPICE1Q8N0Z3 855 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 C16orf52Q8NHV5 167 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 COQ8BQ96D53 544 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 MCRS1Q96EZ8 462 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 REXO5Q96IC2 774 aaKnown RBP3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 GATA5Q9BWX5 397 aaPredicted RBP3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 PRDM16Q9HAZ2 1276 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 MLXIPLQ9NP71 852 aa3.43□□□□□ -1.86
SCARNA18-201ENST00000459004 C2CD4BA6NLJ0 364 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 EFCAB8A8MWE9 144 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 SYT5O00445 386 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 PPEF2O14830 753 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TLR2O60603 784 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 RPP40O75818 363 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 FGBP02675 491 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 LMO1P25800 156 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 HOXD9P28356 352 aaPredicted RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 PDIA3P30101 505 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 HOXA7P31268 230 aaPredicted RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 AKT1P31749 480 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 SERPINF1P36955 418 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 SOX2P48431 317 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 RHBDL3P58872 404 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TLE3Q04726 772 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 DMWDQ09019 674 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 CHAF1AQ13111 956 aaPredicted RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TRIM60Q495X7 471 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 ZNF569Q5MCW4 686 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 ATPAF1Q5TC12 328 aaPredicted RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 PAPD7Q5XG87 772 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 RBM44Q6ZP01 1051 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 MRPL10Q7Z7H8 261 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 KAT2BQ92831 832 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TRMT61AQ96FX7 289 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 GPR78Q96P69 363 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 CRB3Q9BUF7 120 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 KATNAL1Q9BW62 490 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 SPRTNQ9H040 489 aaPredicted RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 CCDC134Q9H6E4 229 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 ERVK-5Q9HDB9 667 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TMEM184CQ9NVA4 438 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 TRNAU1APQ9NX07 287 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 MTMR4Q9NYA4 1195 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 HERC5Q9UII4 1024 aaKnown RBP3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 SLC12A4Q9UP95 1085 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 B3GNT3Q9Y2A9 372 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 ZBTB1Q9Y2K1 713 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 EMSYQ7Z589 1322 aa3.42□□□□□ -1.86
SCARNA18-201ENST00000459004 ZMYM2Q9UBW7 1377 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 SLC22A23A1A5C7 686 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A18PA6NE21 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A16PA6NEW6 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 C3orf70A6NLC5 250 aaPredicted RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A9PA6NNJ1 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A5PA8MXJ8 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 M0QYT0 321 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ADAM10O14672 748 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 PPP6R2O75170 966 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CNOT3O75175 753 aaKnown RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 KAT7O95251 611 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 TNFRSF6BO95407 300 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 LARGE1O95461 756 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ITGA2BP08514 1039 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CYP3A4P08684 503 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A15PP0C7V4 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM90A14PP0C7W9 464 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 AKR1A1P14550 325 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ST6GAL1P15907 406 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 TFEBP19484 476 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 GRK5P34947 590 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CPA2P48052 419 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CDK7P50613 346 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 PLCD1P51178 756 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 RPL15P61313 204 aaKnown RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 RBM6P78332 1123 aaKnown RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 GALNT1Q10472 559 aaPredicted RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 KRT72Q14CN4 511 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 RABEP1Q15276 862 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ANXA2RQ3ZCQ2 193 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ANKRD40Q6AI12 368 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 TMEM88Q6PEY1 159 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 SHC4Q6S5L8 630 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 DHRS13Q6UX07 377 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 SLC39A5Q6ZMH5 540 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 FAM57BQ71RH2 274 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 RHPN2Q8IUC4 686 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CCDC117Q8IWD4 279 aaPredicted RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 NANOGP1Q8N7R0 232 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ATG16L2Q8NAA4 619 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ADPRHL1Q8NDY3 354 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 POF1BQ8WVV4 589 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 RMDN3Q96TC7 470 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms