RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 DGKIO75912 1065 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 CBX6O95503 412 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 HSPA4LO95757 839 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 LSM8O95777 96 aaKnown RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 KRT3P12035 628 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 ADRA1DP25100 572 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 RPL22P35268 128 aaKnown RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 YARSP54577 528 aaKnown RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 CDH8P55286 799 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 C21orf58P58505 322 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 OVGP1Q12889 678 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 TAF5Q15542 800 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 MAPK6Q16659 721 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 OTOAQ7RTW8 1153 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 LRRC71Q8N4P6 559 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 KCNN1Q92952 543 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 SAP130Q9H0E3 1048 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 NPHS2Q9NP85 383 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 ADAMTS5Q9UNA0 930 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 SHOC2Q9UQ13 582 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 LRCH4O75427 683 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 CYP11A1P05108 521 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 KRT19P08727 400 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 STAT5BP51692 787 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 SGSM1Q2NKQ1 1148 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 EPHX4Q8IUS5 362 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 UNC45BQ8IWX7 931 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 FBXO36Q8NEA4 188 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 ADAMTS18Q8TE60 1221 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 HIC2Q96JB3 615 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 WDR83Q9BRX9 315 aaKnown RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
SYNE2-207ENST00000458046 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 SLC24A2Q9UI40 661 aa12.17□□□□□ -0.46
SYNE2-207ENST00000458046 PSME4Q14997 1843 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 ARPC4-TTLL3A0A0A6YYG9 625 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 FAM189A1O60320 539 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 MSCO60682 206 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 TOM1L1O75674 476 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 T-ENOLP0DO92 83 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SOX9P48436 509 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 OAZ1P54368 228 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 CXorf57Q6NSI4 855 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SHQ1Q6PI26 577 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 PPIL6Q8IXY8 311 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 UTP15Q8TED0 518 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 HSPH1Q92598 858 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 QPCTLQ9NXS2 382 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SENP1Q9P0U3 644 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 NKX1-2Q9UD57 310 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 EIF3FO00303 357 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 FRS3O43559 492 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 GJB1P08034 283 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 KDELR1P24390 212 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 ARL4CP56559 192 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 TAF1BQ53T94 588 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 EFHC2Q5JST6 749 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 FAM205BPQ63HN1 556 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 ZNF619Q8N2I2 560 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 RNF149Q8NC42 400 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 TNIP2Q8NFZ5 429 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 TCP10LQ8TDR4 215 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 C10orf82Q8WW14 230 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SHDQ96IW2 340 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 ZNF570Q96NI8 536 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 RAB3IPQ96QF0 476 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 PAFAH2Q99487 392 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 MRPL4Q9BYD3 311 aaKnown RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SYNCQ9H7C4 482 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 BRD9Q9H8M2 597 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 SLC17A7Q9P2U7 560 aa12.16□□□□□ -0.46
SYNE2-207ENST00000458046 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-207ENST00000458046 DCTN3O75935 186 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TMEM63AO94886 807 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TBX18O95935 607 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ASPAP45381 313 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 EIF1AXP47813 144 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms