RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLHL5Q96PQ7 755 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TKTL2Q9H0I9 626 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TSPYL1Q9H0U9 437 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 MSRAQ9UJ68 235 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 NR2E1Q9Y466 385 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZNF638Q14966 1978 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SYNJ2BP-COX16A0A087WUM0 186 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC85CA6NKD9 419 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 H3BNC9 293 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 SMAPO00193 183 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 EEF2KO00418 725 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 TTI1O43156 1089 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 SOAT2O75908 522 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 LATS1O95835 1130 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CA3P07451 260 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CD48P09326 243 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 HNRNPA1P09651 372 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 MX2P20592 715 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLRC2P26717 231 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CDC25CP30307 473 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 BMP8BP34820 402 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATP5C1P36542 298 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PTGIRP43119 386 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATXN1P54253 815 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 VSNL1P62760 191 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 COG7P83436 770 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 OTUD4Q01804 1114 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 GUCY2DQ02846 1103 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZNF33AQ06730 810 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 DPYSQ14117 519 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PPP1R7Q15435 360 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 SHHQ15465 462 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CA9Q16790 459 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAB6CQ53S08 254 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 C9orf50Q5SZB4 431 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 TTC27Q6P3X3 843 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 TMCO3Q6UWJ1 677 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CEP128Q6ZU80 1094 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ANKS1BQ7Z6G8 1248 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 MTERF4Q7Z6M4 381 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 DNAJB7Q7Z6W7 309 aaPredicted RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 LRRC49Q8IUZ0 686 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CDKL3Q8IVW4 592 aaPredicted RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 LZTR1Q8N653 840 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PQLC3Q8N755 202 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PLD5Q8N7P1 536 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 KREMEN2Q8NCW0 462 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 GIPC2Q8TF65 315 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 C1orf54Q8WWF1 131 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CASP10Q92851 521 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 AZIN2Q96A70 460 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC114Q96M63 670 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 GCNAQ96QF7 691 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PNKPQ96T60 521 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 GDF15Q99988 308 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 HERPUD2Q9BSE4 406 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 C17orf80Q9BSJ5 609 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 NACA2Q9H009 215 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAB6CQ9H0N0 254 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CATSPERBQ9H7T0 1116 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 PCDH9Q9HC56 1237 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ARHGEF4Q9NR80 690 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 OSER1Q9NX31 292 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 COX16Q9P0S2 106 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 WHRNQ9P202 907 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 OR12D3Q9UGF7 316 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZNF148Q9UQR1 794 aa9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 R3HDM2Q9Y2K5 976 aaKnown RBP9.22□□□□□ -0.93
CDC42EP3-204ENST00000457889 BCLAF3A2AJT9 711 aaKnown RBP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 DCLK1O15075 740 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 DAPK3O43293 454 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 MTSS1O43312 755 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 ATP8B1O43520 1251 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 XYLBO75191 536 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 OAS1P00973 400 aaKnown RBP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 C8AP07357 584 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 RBP3P10745 1247 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 GOT1P17174 413 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 DDX6P26196 483 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 CA8P35219 290 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 CLCN4P51793 760 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 CDR1P51861 262 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 MLLT6P55198 1093 aaPredicted RBP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 ERVFC1P60507 584 aa9.21□□□□□ -0.94
CDC42EP3-204ENST00000457889 DYNLT1P63172 113 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms