RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 SDC4P31431 198 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 STX2P32856 288 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RPL22P35268 128 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CCR2P41597 374 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CACNA2D1P54289 1103 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 EIF3BP55884 814 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MAP3K7CLP57077 242 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CRADDP78560 199 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SKOR1P84550 965 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KLF1Q13351 362 aaPredicted RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PTK6Q13882 451 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CBX2Q14781 532 aaPredicted RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RAB30Q15771 203 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CNGA2Q16280 664 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CYP1B1Q16678 543 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SOWAHAQ2M3V2 549 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CTC1Q2NKJ3 1217 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FNBP1LQ5T0N5 605 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 STXBP5Q5T5C0 1151 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAM171A1Q5VUB5 890 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 WSCD1Q658N2 575 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 C3orf62Q6ZUJ4 267 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CCDC121Q6ZUS5 278 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TMC7Q7Z402 723 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KDELC2Q7Z4H8 507 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CD302Q8IX05 232 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TP53INP2Q8IXH6 220 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 EXOC8Q8IYI6 725 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CMTR2Q8IYT2 770 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RNF168Q8IYW5 571 aaPredicted RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ABI1Q8IZP0 508 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 UBR7Q8N806 425 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CCNYQ8ND76 341 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 BEST2Q8NFU1 509 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 OR10T2Q8NGX3 314 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RIN3Q8TB24 985 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PYROXD1Q8WU10 500 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SEC14L1Q92503 715 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 EDEM1Q92611 657 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAF2Q96CS3 445 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MRPL38Q96DV4 380 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SEC16BQ96JE7 1060 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 VCPIP1Q96JH7 1222 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SNX27Q96L92 541 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KCNK16Q96T55 309 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CCDC77Q9BR77 488 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FTHL17Q9BXU8 183 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NFKBIZQ9BYH8 718 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZBP1Q9H171 429 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ASB7Q9H672 318 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 EPHX3Q9H6B9 360 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TLR9Q9NR96 1032 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RAB6BQ9NRW1 208 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ASNSD1Q9NWL6 643 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 IL1RAPL1Q9NZN1 696 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SLC12A6Q9UHW9 1150 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 XPO7Q9UIA9 1087 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TPX2Q9ULW0 747 aaKnown RBP3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SNX10Q9Y5X0 201 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PIEZO1Q92508 2521 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GVINP1Q7Z2Y8 2422 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NUP205Q92621 2012 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZNF292O60281 2723 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KPNA7A9QM74 516 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 DNALI1O14645 258 aaPredicted RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CAPN9O14815 690 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PAPSS1O43252 624 aaPredicted RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TGM5O43548 720 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SHOX2O60902 331 aaPredicted RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 HUS1O60921 280 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAM155BO75949 473 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SEC24AO95486 1093 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 LSM8O95777 96 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TRUB2O95900 331 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAM107AO95990 144 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KRT7P08729 469 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CA4P22748 312 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GRIA1P42261 906 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ALDH7A1P49419 539 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 DRG2P55039 364 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 VCPP55072 806 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ARPP19P56211 112 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GBE1Q04446 702 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ADIGQ0VDE8 80 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 OLIG2Q13516 323 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SPARCL1Q14515 664 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZBTB6Q15916 424 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SEPT7Q16181 437 aaKnown RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 HIF1AQ16665 826 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAM187BQ17R55 369 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SLC5A9Q2M3M2 681 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CCDC14Q49A88 953 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MDH1BQ5I0G3 518 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 AGBL2Q5U5Z8 902 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NAIF1Q69YI7 327 aaPredicted RBP3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FUT10Q6P4F1 479 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GLB1LQ6UWU2 654 aa3.16□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CES3Q6UWW8 571 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms