RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 B2RBV5 119 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 RASSF9O75901 435 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 MATKP42679 507 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 POU5F1BQ06416 359 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 POU6F1Q14863 301 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 PDK1Q15118 436 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 ADGRD1Q6QNK2 874 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 RYBPQ8N488 228 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 CCNYL1Q8N7R7 359 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 GSDMBQ8TAX9 411 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 MOCOSQ96EN8 888 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 APOPT1Q96IL0 206 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 USP29Q9HBJ7 922 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 ARHGEF4Q9NR80 690 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 ZNF358Q9NW07 568 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 SCAMP3O14828 347 aaKnown RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 MSI1O43347 362 aaKnown RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 IL4RP24394 825 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 PNPLA4P41247 253 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 OR1G1P47890 313 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 INCA1Q0VD86 236 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 TAF11Q15544 211 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 LRRC36Q1X8D7 754 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 ATG16L1Q676U5 607 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
SMPD4-213ENST00000454468 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 PIGVQ9NUD9 493 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 SYBUQ9NX95 663 aa12.32□□□□□ -0.44
SMPD4-213ENST00000454468 FAM72CH0Y354 149 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 CHADO15335 359 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ETFBP38117 255 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 HIC1Q14526 733 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 FAM187BQ17R55 369 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 MUM1Q2TAK8 710 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 FAM72AQ5TYM5 149 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 AP1ARQ63HQ0 302 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 FAM72DQ6L9T8 149 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 TMEM110Q86TL2 294 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 FAM72BQ86X60 149 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 LRRC52Q8N7C0 313 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 TTC1Q99614 292 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 WDR83Q9BRX9 315 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ADAMTS10Q9H324 1103 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GGA2Q9UJY4 613 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 PACSIN3Q9UKS6 424 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 MEI4A8MW99 385 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 CERCAMQ5T4B2 595 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 C6orf163Q5TEZ5 329 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 MCUQ8NE86 351 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 PRR11Q96HE9 360 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ADAM2Q99965 735 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 THTPAQ9BU02 230 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 TBC1D10AQ9BXI6 508 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 IARS2Q9NSE4 1012 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 DCAF8L1A6NGE4 600 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 SLC15A5A6NIM6 579 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 TPP1O14773 563 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 DNAJC6O75061 913 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GPR32O75388 356 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GABBR2O75899 941 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 HSPA4LO95757 839 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ELNP15502 786 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 GCKP35557 465 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 XRCC4Q13426 336 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 STRA8Q7Z7C7 330 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 CAND1Q86VP6 1230 aaKnown RBP12.31□□□□□ -0.44
SMPD4-213ENST00000454468 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 WNT8BQ93098 351 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 DUSP16Q9BY84 665 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 POPDC2Q9HBU9 364 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms