RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ECHDC1Q9NTX5 307 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ZMYM5Q9UJ78 669 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 SATB2Q9UPW6 733 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 DIDO1Q9BTC0 2240 aaKnown RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 DENND4CQ5VZ89 1909 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 IGLV3-22A0A075B6J6 115 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 A0A1B0GUA9 196 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 ARHGAP10A1A4S6 786 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MEI4A8MW99 385 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 FAM86B1E9PN63 330 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 TRAPPC3O43617 180 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 STK10O94804 968 aaKnown RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 IGLV3-19P01714 112 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 FAM86B2P0C5J1 330 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 SRGAP2CP0DJJ0 459 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 ARF4P18085 180 aaPredicted RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 RBMS1P29558 406 aaKnown RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 TNFSF9P41273 254 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 PRKCEQ02156 737 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 CDK5R2Q13319 367 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 UBE2SQ16763 222 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 BBS9Q3SYG4 887 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 HSP90AB4PQ58FF6 505 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 CCDC178Q5BJE1 867 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 EGFLAMQ63HQ2 1017 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MFSD6Q6ZSS7 791 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 C22orf34Q6ZV56 151 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 NIPA1Q7RTP0 329 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 UBE3DQ7Z6J8 389 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MON1AQ86VX9 555 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 LSRQ86X29 649 aaPredicted RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 SMAP1Q8IYB5 467 aaPredicted RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 TMEM57Q8N5G2 664 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 TOP6BLQ8N6T0 577 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MAB21L3Q8N8X9 362 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 IPO4Q8TEX9 1081 aaKnown RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 LRRC15Q8TF66 581 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 YTHDC1Q96MU7 727 aaKnown RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 PNKPQ96T60 521 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MIPEPQ99797 713 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 SH2D3AQ9BRG2 576 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 KIF9Q9HAQ2 790 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 PTPRHQ9HD43 1115 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 ZSWIM5Q9P217 1185 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 ACSL6Q9UKU0 697 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MAPK8IP1Q9UQF2 711 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 R3HCC1Q9Y3T6 440 aaKnown RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 COL4A3BPQ9Y5P4 624 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 COL27A1Q8IZC6 1860 aaPredicted RBP5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 NEDD4P46934 1319 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 MYOFQ9NZM1 2061 aa5.7□□□□□ -1.5
SBDSP1-204ENST00000453858 H7C4K7 107 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SYN3O14994 580 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 RTN2O75298 545 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 VPS4BO75351 444 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SOAT2O75908 522 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SLITRK5O94991 958 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 C4BPAP04003 597 aaKnown RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 F13BP05160 661 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 RARGP13631 454 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 HOXB2P14652 356 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ADMP35318 185 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 AVPR1AP37288 418 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 EIF2DP41214 584 aaKnown RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 GRIA2P42262 883 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 KIR3DL1P43629 444 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ALDH1A3P47895 512 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 RNF4P78317 190 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ZXDBP98169 803 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 LAMTOR4Q0VGL1 99 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 PLD1Q13393 1074 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 PCBP1Q15365 356 aaKnown RBP eCLIP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SEC23AQ15436 765 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ISXQ2M1V0 245 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 EIF2S3LQ2VIR3 472 aaKnown RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 CTXN3Q4LDR2 81 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 TXNDC8Q6A555 127 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 BORAQ6PGQ7 559 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 TTC9BQ8N6N2 239 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 CRYGNQ8WXF5 182 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ESR2Q92731 530 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ANAPC16Q96DE5 110 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 PPP1R10Q96QC0 940 aaKnown RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 DEPDC7Q96QD5 511 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SLC22A12Q96S37 553 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ACOX2Q99424 681 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 GABRG3Q99928 467 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 SLC12A9Q9BXP2 914 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 CASS4Q9NQ75 786 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 VPS4AQ9UN37 437 aa5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 PRRC2AP48634 2157 aaKnown RBP5.69□□□□□ -1.5
SBDSP1-204ENST00000453858 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 LAD1O00515 517 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 TSPAN3O60637 253 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 DNAJA2O60884 412 aa5.68□□□□□ -1.5
SBDSP1-204ENST00000453858 OAZ2O95190 189 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms