RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BRCC3P46736 316 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 NRLP54845 237 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 GPX6P59796 221 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 TCEAL5Q5H9L2 206 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 C6orf89Q6UWU4 347 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 PAQR9Q6ZVX9 377 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ZC3H18Q86VM9 953 aaKnown RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 RNF168Q8IYW5 571 aaPredicted RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 PRMT1Q99873 361 aaKnown RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 CLUHO75153 1309 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 H7C0C1 242 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 SOD2P04179 222 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 L1CAMP32004 1257 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 RDXP35241 583 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 ATP5OP48047 213 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 ADCY1Q08828 1119 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 WSCD1Q658N2 575 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 MICALCLQ6ZW33 695 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 TADA2BQ86TJ2 420 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 DUSP16Q9BY84 665 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 NSUN3Q9H649 340 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 VPS37BQ9H9H4 285 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.633e-6■■■■□ 22.8
PKP4-206ENST00000452162 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 C2CD2LO14523 706 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 CXCL14O95715 111 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 CTSAP10619 480 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 BRAFP15056 766 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 CA8P35219 290 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 CBLBQ13191 982 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 MPP2Q14168 576 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 KCNJ11Q14654 390 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 RASA2Q15283 850 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 EFHC1Q5JVL4 640 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 STRADAQ7RTN6 431 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 RBM23Q86U06 439 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 SEC16BQ96JE7 1060 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 HERC2P3Q9BVR0 1158 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 PPCSQ9HAB8 311 aa11.09□□□□□ -0.63
PKP4-206ENST00000452162 XPO7Q9UIA9 1087 aaKnown RBP11.09□□□□□ -0.63
PKP4-206ENST00000452162 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■■■■ 97.4
PKP4-206ENST00000452162 BCLAF3A2AJT9 711 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 C2orf71A6NGG8 1288 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CLDN5O00501 218 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 PER2O15055 1255 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 DAB1O75553 588 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 NPR3P17342 541 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CYP2F1P24903 491 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 MATKP42679 507 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 ADIGQ0VDE8 80 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 TMED2Q15363 201 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 EFHC2Q5JST6 749 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 FAM171A1Q5VUB5 890 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 OTUD1Q5VV17 481 aaPredicted RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 YTHDF3Q7Z739 585 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 SRRM1Q8IYB3 904 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 LRRC34Q8IZ02 419 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 TAB3Q8N5C8 712 aaPredicted RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 CCDC185Q8N715 623 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 MRPL43Q8N983 215 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 ATP11CQ8NB49 1132 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 KCTD13Q8WZ19 329 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 SENP8Q96LD8 212 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 KCTD15Q96SI1 283 aaPredicted RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 SLC24A2Q9UI40 661 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 AP4E1Q9UPM8 1137 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 VCANP13611 3396 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 TRIM66O15016 1216 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CHADO15335 359 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 LILRB3O75022 631 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 BEST1O76090 585 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 TSHRP16473 764 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 IFNAR2P48551 515 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 HYAL1Q12794 435 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 NR1H3Q13133 447 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 PPP6R3Q5H9R7 873 aaPredicted RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 RTP2Q5QGT7 225 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CLEC20AQ6ZU45 233 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 BNIPLQ7Z465 357 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CPLX4Q7Z7G2 160 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 TRABD2AQ86V40 505 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 PYROXD1Q8WU10 500 aa11.08□□□□□ -0.64
PKP4-206ENST00000452162 NDRG1Q92597 394 aaKnown RBP11.08□□□□□ -0.64
PKP4-206ENST00000452162 MAGEB5Q9BZ81 275 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms