RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FAM111AQ96PZ2 611 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 PPP1R10Q96QC0 940 aaKnown RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 ST3GAL5Q9UNP4 418 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 MYBPHLA2RUH7 354 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 CFAP69A5D8W1 941 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 CASTOR2A6NHX0 329 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.42
COL27A1-202ENST00000451716 LPXNO60711 386 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.42
COL27A1-202ENST00000451716 C1QAP02745 245 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 AMHP03971 560 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 ARL4AP40617 200 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 MRPS5P82675 430 aaKnown RBP12.46□□□□□ -0.42
COL27A1-202ENST00000451716 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 BSPRYQ5W0U4 402 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 UNC5AQ6ZN44 842 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 TRPV1Q8NER1 839 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 MIPOL1Q8TD10 442 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 SENP8Q96LD8 212 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 CRTAC1Q9NQ79 661 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 PIGVQ9NUD9 493 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 FETUBQ9UGM5 382 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 FZD10Q9ULW2 581 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 USP3Q9Y6I4 520 aa12.46□□□□□ -0.42
COL27A1-202ENST00000451716 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
COL27A1-202ENST00000451716 TRIM49D1C9J1S8 452 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 E2F6O75461 281 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ZWINTO95229 277 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
COL27A1-202ENST00000451716 TKTL1P51854 596 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 SLC18A1P54219 525 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ELF3P78545 371 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-202ENST00000451716 AP1B1Q10567 949 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 BNIP1Q12981 228 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 PGLYRP2Q96PD5 576 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 NPHS2Q9NP85 383 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 SLC17A6Q9P2U8 582 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 DCTN4Q9UJW0 460 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 STARD13Q9Y3M8 1113 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 IQANK1A0A1B0GTG1 560 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 FAM72CH0Y354 149 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 GSTA1P08263 222 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 GNAT1P11488 350 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 FAM72AQ5TYM5 149 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 GDF6Q6KF10 455 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-202ENST00000451716 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 C17orf99Q6UX52 265 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
COL27A1-202ENST00000451716 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 HTR3CQ8WXA8 447 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 TTC17Q96AE7 1141 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ERP27Q96DN0 273 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 QKIQ96PU8 341 aaKnown RBP eCLIP12.45□□□□□ -0.421e-9■■■□□ 14.6
COL27A1-202ENST00000451716 ULBP1Q9BZM6 244 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 MYLK2Q9H1R3 596 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ANLNQ9NQW6 1124 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 ITM2BQ9Y287 266 aa12.45□□□□□ -0.42
COL27A1-202ENST00000451716 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 E7ENQ6 273 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 GCATO75600 419 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CSH1P0DML2 217 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CSH2P0DML3 217 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 RGS2P41220 211 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 OLIG2Q13516 323 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 PLEKHG4Q58EX7 1191 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 STRADAQ7RTN6 431 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 LRRC6Q86X45 466 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 TFB1MQ8WVM0 346 aaKnown RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 KATNAL1Q9BW62 490 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SLC13A1Q9BZW2 595 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 FAM105AQ9NUU6 356 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CHKBQ9Y259 395 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 I6L893 689 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■□□□□ 9
COL27A1-202ENST00000451716 FYNP06241 537 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 USP17L7P0C7H9 530 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SCNN1GP51170 649 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SESN3P58005 492 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 MRPS6P82932 125 aaKnown RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 MYBPC3Q14896 1274 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 ANKRD20A1Q5TYW2 823 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms