RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 AZIN2Q96A70 460 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 BTN2A3PQ96KV6 586 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 WDCPQ9H6R7 721 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 ECT2Q9H8V3 914 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 TRIM10Q9UDY6 481 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
VPS33A-202ENST00000451053 TMEM110-MUSTN1A8MSY1 372 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 MYO1FO00160 1098 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 GFRA2O00451 464 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 TSPAN3O60637 253 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 LRCH4O75427 683 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 DESP17661 470 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 GGCXP38435 758 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 SOX9P48436 509 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 GNG11P61952 73 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
VPS33A-202ENST00000451053 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
VPS33A-202ENST00000451053 DHCR24Q15392 516 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 LY6G5CQ5SRR4 150 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 ADGRF1Q5T601 910 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 SCYL2Q6P3W7 929 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 RFWD3Q6PCD5 774 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 RHBDF2Q6PJF5 856 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 TMEM25Q86YD3 366 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 CPXM2Q8N436 756 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 CPA6Q8N4T0 437 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 CSGALNACT1Q8TDX6 532 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 MYEOVQ96EZ4 313 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 C16orf45Q96MC5 204 aaPredicted RBP13.5□□□□□ -0.25
VPS33A-202ENST00000451053 PEBP4Q96S96 227 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 SPHK2Q9NRA0 654 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 SLC12A6Q9UHW9 1150 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 PAXBP1Q9Y5B6 917 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 SNX10Q9Y5X0 201 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 DUSP10Q9Y6W6 482 aa13.5□□□□□ -0.25
VPS33A-202ENST00000451053 RNF8O76064 485 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 PROSCO94903 275 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 MOCS3O95396 460 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 ADH5P11766 374 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 TCF4P15884 667 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 TACR2P21452 398 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 MIPP30301 263 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 ADRA1BP35368 520 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 CHKAP35790 457 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 SGSHP51688 502 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 ZXDAP98168 799 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 PFKPQ01813 784 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 MESDQ14696 234 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 GAB4Q2WGN9 574 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 MS4A13Q5J8X5 152 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 RAP1GAP2Q684P5 730 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 CYP4V2Q6ZWL3 525 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-202ENST00000451053 CHSY1Q86X52 802 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 UBALD2Q8IYN6 164 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 BHMTQ93088 406 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 NTAN1Q96AB6 310 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 PRICKLE1Q96MT3 831 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-202ENST00000451053 PRMT1Q99873 361 aaKnown RBP13.49□□□□□ -0.25
VPS33A-202ENST00000451053 MAGEB5Q9BZ81 275 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 SIK2Q9H0K1 926 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 GPATCH2LQ9NWQ4 482 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 PCSK1NQ9UHG2 260 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 CA14Q9ULX7 337 aa13.49□□□□□ -0.25
VPS33A-202ENST00000451053 DCXO43602 365 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 BUB1O43683 1085 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 ADH1CP00326 375 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 IL1R2P27930 398 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 GJA4P35212 333 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 PCK1P35558 622 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 ACAP1Q15027 740 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 ANO4Q32M45 955 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 SLC44A4Q53GD3 710 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 NAIF1Q69YI7 327 aaPredicted RBP13.48□□□□□ -0.25
VPS33A-202ENST00000451053 C11orf63Q6NUN7 778 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 FBXL22Q6P050 247 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 SLFN11Q7Z7L1 901 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 C14orf80Q86SX3 495 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 C12orf40Q86WS4 652 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 LGI2Q8N0V4 545 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 TPCN2Q8NHX9 752 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 HAPLN3Q96S86 360 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 DDX50Q9BQ39 737 aaKnown RBP13.48□□□□□ -0.25
VPS33A-202ENST00000451053 BBS2Q9BXC9 721 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 PLK2Q9NYY3 685 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
VPS33A-202ENST00000451053 FZD10Q9ULW2 581 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms