RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 USP8P40818 1118 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 RPL6Q02878 288 aaKnown RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 ZBTB16Q05516 673 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 PDCLQ13371 301 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 EIF4EBP2Q13542 120 aaPredicted RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 ZNF234Q14588 700 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 DPCR1Q3MIW9 517 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 FAM133BQ5BKY9 247 aaKnown RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 SYCP2LQ5T4T6 812 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 LYSMD4Q5XG99 296 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 SLC23A3Q6PIS1 610 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 HJURPQ8NCD3 748 aaPredicted RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 C1orf131Q8NDD1 294 aaKnown RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 CADM4Q8NFZ8 388 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 DQX1Q8TE96 717 aaKnown RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 CLEC4CQ8WTT0 213 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 P2RY11Q96G91 374 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 ZNF419Q96HQ0 510 aaPredicted RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 LSM14BQ9BX40 385 aaKnown RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 PCED1AQ9H1Q7 454 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 DNAJC12Q9UKB3 198 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 INVSQ9Y283 1065 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 IGHV1OR15-9A0A0B4J2B8 117 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 E5RJQ4 531 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 MSI1O43347 362 aaKnown RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 HSF2BPO75031 334 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 NDUFS2O75306 463 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 IGLV3-25P01717 112 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 ASLP04424 464 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 TPM2P07951 284 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 DLDP09622 509 aaKnown RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 HLA-FP30511 346 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 IL12RB1P42701 662 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 WASP42768 502 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 OXCT1P55809 520 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 CDK17Q00537 523 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 CAMK2GQ13555 558 aaPredicted RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 SLC12A1Q13621 1099 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 DUOXA1Q1HG43 343 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 FUT11Q495W5 492 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 KIAA1211LQ6NV74 962 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 SERPINA13PQ6UXR4 307 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 ATP6V0D2Q8N8Y2 350 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 PIGKQ92643 395 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 CIPCQ9C0C6 399 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 SIX2Q9NPC8 291 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 ZDHHC4Q9NPG8 344 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 TMEM9BQ9NQ34 198 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 USP36Q9P275 1121 aaKnown RBP16.64■□□□□ 0.25
SGCE-208ENST00000450385 SUSD2Q9UGT4 822 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 GGA2Q9UJY4 613 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
SGCE-208ENST00000450385 CACNA1EQ15878 2313 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 LNP1A1A4G5 178 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 DCDC2BA2VCK2 349 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 KCNJ18B7U540 433 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 WASH3PC4AMC7 463 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 FOXN3O00409 490 aaPredicted RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 PIK3R2O00459 728 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 TSPAN3O60637 253 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 TRUB2O95900 331 aaKnown RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 PABPC1P11940 636 aaKnown RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 POLR2EP19388 210 aaKnown RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 CLCN1P35523 988 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SCNN1AP37088 669 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 ZNF33AQ06730 810 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SFSWAPQ12872 951 aaKnown RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 KCNJ12Q14500 433 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 WDR45BQ5MNZ6 344 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 TMEM215Q68D42 235 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 C11orf57Q6ZUT1 292 aaPredicted RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 ADIPOR2Q86V24 386 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 TMPRSS6Q8IU80 811 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 WDTC1Q8N5D0 677 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 PRCCQ92733 491 aaPredicted RBP16.63■□□□□ 0.25
SGCE-208ENST00000450385 TTC17Q96AE7 1141 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SIPA1Q96FS4 1042 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SLC2A13Q96QE2 648 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 EDEM2Q9BV94 578 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 NUP58Q9BVL2 599 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 TMEM245Q9H330 911 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 PLCB1Q9NQ66 1216 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 CYTH4Q9UIA0 394 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 CLEC4EQ9ULY5 219 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SCML1Q9UN30 329 aa16.63■□□□□ 0.25
SGCE-208ENST00000450385 SPTBN2O15020 2390 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms