RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
MSH5-209ENST00000450148 CACNA1EQ15878 2313 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 AP5Z1O43299 807 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 MED7O43513 233 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 TIMM44O43615 452 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 RPL6Q02878 288 aaKnown RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 PDCLQ13371 301 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 MAN2A1Q16706 1144 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 PTPRNQ16849 979 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 TRIM61Q5EBN2 209 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 LYSMD4Q5XG99 296 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 SLC23A3Q6PIS1 610 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 SLC36A4Q6YBV0 504 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 TAC4Q86UU9 113 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 UNC45BQ8IWX7 931 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 WFIKKN2Q8TEU8 576 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 DDX1Q92499 740 aaKnown RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 ZNF419Q96HQ0 510 aaPredicted RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 TMEM245Q9H330 911 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 XPO7Q9UIA9 1087 aaKnown RBP12.85□□□□□ -0.35
MSH5-209ENST00000450148 PCDHGC3Q9UN70 934 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
MSH5-209ENST00000450148 KCNJ18B7U540 433 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 IRAK2O43187 625 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 SART1O43290 800 aaKnown RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 PABPC1P11940 636 aaKnown RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 HLA-EP13747 358 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CD70P32970 193 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 HOXD12P35452 270 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CLCN1P35523 988 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 MTIF2P46199 727 aaKnown RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 TAF5Q15542 800 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CYB5D2Q8WUJ1 264 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 GOLGA1Q92805 767 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 MYO19Q96H55 970 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CPXM1Q96SM3 734 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 PRDM16Q9HAZ2 1276 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 CAPN10Q9HC96 672 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 ITM2CQ9NQX7 267 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 WSB2Q9NYS7 404 aaPredicted RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
MSH5-209ENST00000450148 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
MSH5-209ENST00000450148 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 TBL1XO60907 577 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 KCNK5O95279 499 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 USP8P40818 1118 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 DPP6P42658 865 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 SLC11A2P49281 568 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 CAMK2GQ13555 558 aaPredicted RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 STARD3Q14849 445 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 MBLAC2Q68D91 279 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 KIAA1324Q6UXG2 1013 aaKnown RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 TUBGCP2Q9BSJ2 902 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 LHX5Q9H2C1 402 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 TMEM9BQ9NQ34 198 aa12.83□□□□□ -0.36
MSH5-209ENST00000450148 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
MSH5-209ENST00000450148 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
MSH5-209ENST00000450148 EPHX1P07099 455 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 ENGP17813 658 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 PMLP29590 882 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 CD6P30203 668 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 TPMTP51580 245 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 LMAN2Q12907 356 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 E2F5Q15329 346 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 TPD52L1Q16890 204 aaPredicted RBP12.82□□□□□ -0.36
MSH5-209ENST00000450148 DUOXA1Q1HG43 343 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 PTPN20Q4JDL3 420 aa12.82□□□□□ -0.36
MSH5-209ENST00000450148 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
MSH5-209ENST00000450148 FSCBQ5H9T9 825 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms