RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 DDR2Q16832 855 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 TRIM60Q495X7 471 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 CCDC38Q502W7 563 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 CAPN12Q6ZSI9 719 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 TMEM173Q86WV6 379 aaPredicted RBP18.27■□□□□ 0.52
LMNA-208ENST00000448611 CYP4X1Q8N118 509 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 NUP93Q8N1F7 819 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 NETO2Q8NC67 525 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 ARHGEF2Q92974 986 aaKnown RBP18.27■□□□□ 0.52
LMNA-208ENST00000448611 PGLYRP2Q96PD5 576 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 FRMD8Q9BZ67 464 aaPredicted RBP18.27■□□□□ 0.52
LMNA-208ENST00000448611 ARHGEF38Q9NXL2 777 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 SNX10Q9Y5X0 201 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 NR2E3Q9Y5X4 410 aa18.27■□□□□ 0.52
LMNA-208ENST00000448611 A0A0A0MRY4 1105 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 EXOC1LA0A1B0GW35 172 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 TBC1D4O60343 1298 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 TSHRP16473 764 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 PBX3P40426 434 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 ZSCAN26Q16670 478 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 TAOK1Q7L7X3 1001 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 TDRPQ86YL5 185 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 TP53INP2Q8IXH6 220 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 VPS52Q8N1B4 723 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.51
LMNA-208ENST00000448611 TTC9BQ8N6N2 239 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 STKLD1Q8NE28 680 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 MDM1Q8TC05 714 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 DIS3LQ8TF46 1054 aaKnown RBP18.27■□□□□ 0.51
LMNA-208ENST00000448611 SPATA13Q96N96 652 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 EPAS1Q99814 870 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 OSBPL2Q9H1P3 480 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 PRDM12Q9H4Q4 367 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 SCML2Q9UQR0 700 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 RAD54BQ9Y620 910 aa18.27■□□□□ 0.51
LMNA-208ENST00000448611 A0A1W2PQH9 124 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 SRRM3A6NNA2 597 aaPredicted RBP18.26■□□□□ 0.51
LMNA-208ENST00000448611 NT5C1B-RDH14C9J2C7 533 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 PPP1R12AO14974 1030 aaPredicted RBP18.26■□□□□ 0.51
LMNA-208ENST00000448611 APRTP07741 180 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 SSTR1P30872 391 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 ELAVL2Q12926 359 aaKnown RBP18.26■□□□□ 0.51
LMNA-208ENST00000448611 RTP2Q5QGT7 225 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 ANKRD20A2Q5SQ80 823 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 ANKRD20A1Q5TYW2 823 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 C1orf53Q5VUE5 145 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 ANKRD20A3Q5VUR7 823 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 DEFB128Q7Z7B8 93 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 IGDCC3Q8IVU1 814 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.519e-9■■■■■ 30.4
LMNA-208ENST00000448611 MCUQ8NE86 351 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 BCL7CQ8WUZ0 217 aaPredicted RBP18.26■□□□□ 0.51
LMNA-208ENST00000448611 CASP10Q92851 521 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 RNF34Q969K3 372 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 P2RY11Q96G91 374 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 OSER1Q9NX31 292 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 RABGEF1Q9UJ41 708 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 TEX264Q9Y6I9 313 aa18.26■□□□□ 0.51
LMNA-208ENST00000448611 AVILO75366 819 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 LRIG2O94898 1065 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 TPSB2P20231 275 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 PHBP35232 272 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 ELK3P41970 407 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 AP1B1Q10567 949 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 SEMA5AQ13591 1074 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 TPSAB1Q15661 275 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 BRMS1LQ5PSV4 323 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 RSPO2Q6UXX9 243 aaPredicted RBP18.25■□□□□ 0.51
LMNA-208ENST00000448611 ARHGEF18Q6ZSZ5 1173 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 CAND1Q86VP6 1230 aaKnown RBP18.25■□□□□ 0.51
LMNA-208ENST00000448611 MON1AQ86VX9 555 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 NPWQ8N729 165 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 ANKLE1Q8NAG6 615 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 MAML1Q92585 1016 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 SELENOSQ9BQE4 189 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 FBXO44Q9H4M3 255 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 PPCSQ9HAB8 311 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 IL37Q9NZH6 218 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 TBK1Q9UHD2 729 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 FNDC1Q4ZHG4 1894 aaPredicted RBP18.25■□□□□ 0.51
LMNA-208ENST00000448611 RNF103O00237 685 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 CHN1P15882 459 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 USP46P62068 366 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 GPR17Q13304 367 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■□□□□ 10.4
LMNA-208ENST00000448611 C3orf62Q6ZUJ4 267 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 PDZD4Q76G19 769 aaPredicted RBP18.25■□□□□ 0.51
LMNA-208ENST00000448611 TAS1R1Q7RTX1 841 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 CENPTQ96BT3 561 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
LMNA-208ENST00000448611 EPN3Q9H201 632 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 FETUBQ9UGM5 382 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 TBX21Q9UL17 535 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 NEU3Q9UQ49 428 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 CHMP2BQ9UQN3 213 aa18.25■□□□□ 0.51
LMNA-208ENST00000448611 PLXNA3P51805 1871 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms