RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 PTPRNQ16849 979 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 HLA-BQ31612 363 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 PKDCCQ504Y2 493 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 C1orf216Q8TAB5 229 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 WFIKKN2Q8TEU8 576 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 SETD7Q8WTS6 366 aaKnown RBP16.19■□□□□ 0.18
TRA2A-203ENST00000448549 ADAMTS14Q8WXS8 1223 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 TFAP2BQ92481 460 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 SNX19Q92543 992 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 ERCC4Q92889 916 aaPredicted RBP16.19■□□□□ 0.18
TRA2A-203ENST00000448549 SLC35C1Q96A29 364 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 C6orf106Q9H6K1 298 aaPredicted RBP16.19■□□□□ 0.18
TRA2A-203ENST00000448549 CNGB3Q9NQW8 809 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 PCOLCE2Q9UKZ9 415 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 FNDC3AQ9Y2H6 1198 aaKnown RBP16.19■□□□□ 0.18
TRA2A-203ENST00000448549 SLCO1B1Q9Y6L6 691 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 AKAP13Q12802 2813 aa16.19■□□□□ 0.18
TRA2A-203ENST00000448549 GOLGA6L7A0A1B0GV03 622 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 TAF4O00268 1085 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 LATS1O95835 1130 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 PABPC1P11940 636 aaKnown RBP16.18■□□□□ 0.18
TRA2A-203ENST00000448549 ACSL1P33121 698 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 MATKP42679 507 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 CSNK1EP49674 416 aaKnown RBP16.18■□□□□ 0.18
TRA2A-203ENST00000448549 COBLL1Q53SF7 1204 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 MBLAC2Q68D91 279 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 PMF1Q6P1K2 205 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 RFWD3Q6PCD5 774 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 TMEM270Q6UE05 265 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 IL27RAQ6UWB1 636 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 LCLAT1Q6UWP7 414 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 KIAA0907Q7Z7F0 614 aaPredicted RBP16.18■□□□□ 0.18
TRA2A-203ENST00000448549 FMR1NBQ8N0W7 255 aaPredicted RBP16.18■□□□□ 0.18
TRA2A-203ENST00000448549 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.18■□□□□ 0.189e-8■□□□□ 9.9
TRA2A-203ENST00000448549 SLC35F5Q8WV83 523 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 GSDMAQ96QA5 445 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 PCED1AQ9H1Q7 454 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 TM7SF3Q9NS93 570 aa16.18■□□□□ 0.18
TRA2A-203ENST00000448549 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 A0A1B0GVT2 93 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 CER1O95813 267 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 TBXAS1P24557 533 aaPredicted RBP16.17■□□□□ 0.18
TRA2A-203ENST00000448549 CD70P32970 193 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 RPS14P62263 151 aaKnown RBP16.17■□□□□ 0.18
TRA2A-203ENST00000448549 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 SLCO6A1Q86UG4 719 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 AHI1Q8N157 1196 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 SCML4Q8N228 414 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 WFDC5Q8TCV5 224 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 ZSWIM1Q9BR11 485 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 PRSS16Q9NQE7 514 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 APOBEC2Q9Y235 224 aaKnown RBP16.17■□□□□ 0.18
TRA2A-203ENST00000448549 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.17■□□□□ 0.18
TRA2A-203ENST00000448549 PCDHB4Q9Y5E5 795 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 SPEGQ15772 3267 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 ADAMTS9Q9P2N4 1935 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 MYH10P35580 1976 aa16.17■□□□□ 0.18
TRA2A-203ENST00000448549 RNF225M0QZC1 329 aaPredicted RBP16.16■□□□□ 0.18
TRA2A-203ENST00000448549 TBL1XO60907 577 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 SMC2O95347 1197 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 CALCAP01258 141 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 IGLV3-27P01718 113 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 CAPNS1P04632 268 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
TRA2A-203ENST00000448549 PAEPP09466 180 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 DLDP09622 509 aaKnown RBP16.16■□□□□ 0.18
TRA2A-203ENST00000448549 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 SLC6A4P31645 630 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 FMO5P49326 533 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 AFF3P51826 1226 aaKnown RBP16.16■□□□□ 0.18
TRA2A-203ENST00000448549 RING1Q06587 406 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 SCAPQ12770 1279 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 CNGA2Q16280 664 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 KIF19Q2TAC6 998 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 FAM133BQ5BKY9 247 aaKnown RBP16.16■□□□□ 0.18
TRA2A-203ENST00000448549 PIK3R6Q5UE93 754 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 MSANTD2Q6P1R3 559 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 GLRX5Q86SX6 157 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 CLEC4CQ8WTT0 213 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 IRGQQ8WZA9 623 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 KAT5Q92993 513 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 SMARCE1Q969G3 411 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 MTG2Q9H4K7 406 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 STIM2Q9P246 746 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 PI4KAP42356 2102 aa16.16■□□□□ 0.18
TRA2A-203ENST00000448549 PCNX2A6NKB5 2137 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 M0QYV0 167 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 ACSL4O60488 711 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 SEMA4FO95754 770 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 DNTTP04053 509 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 C7P10643 843 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 HOXB3P14651 431 aaPredicted RBP16.15■□□□□ 0.18
TRA2A-203ENST00000448549 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
TRA2A-203ENST00000448549 BRD2P25440 801 aaKnown RBP16.15■□□□□ 0.18
TRA2A-203ENST00000448549 SLC11A2P49281 568 aa16.15■□□□□ 0.18
TRA2A-203ENST00000448549 TBX4P57082 545 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms