RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SETSIPP0DME0 302 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 TPH1P17752 444 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 THPOP40225 353 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 TAF1BQ53T94 588 aaPredicted RBP15.27■□□□□ 0.03
SF1-211ENST00000448404 PPM1JQ5JR12 505 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 CEP128Q6ZU80 1094 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.03
SF1-211ENST00000448404 TRIB2Q92519 343 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 SYT15Q9BQS2 421 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 FRMD8P1Q9BZ68 369 aaPredicted RBP15.27■□□□□ 0.03
SF1-211ENST00000448404 DDIT4Q9NX09 232 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 B3GAT3O94766 335 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 RPSAP08865 295 aaKnown RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 NQO1P15559 274 aaKnown RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 ACCSLQ4AC99 568 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 ZNF567Q8N184 647 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 TNIP3Q96KP6 325 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 HNRNPABQ99729 332 aaKnown RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 SIK2Q9H0K1 926 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 ZNF358Q9NW07 568 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 RFPL1O75677 317 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 ATP6V1G2O95670 118 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 APOEP02649 317 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 SRGAP2BP0DMP2 458 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 T-ENOLP0DO92 83 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 ELNP15502 786 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 MRPS6P82932 125 aaKnown RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 C17orf99Q6UX52 265 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 NLRP9Q7RTR0 991 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 FAM35AQ86V20 835 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 SLC26A11Q86WA9 606 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 CDKL3Q8IVW4 592 aaPredicted RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 STK32AQ8WU08 396 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 OXNAD1Q96HP4 312 aaPredicted RBP15.26■□□□□ 0.03
SF1-211ENST00000448404 QKIQ96PU8 341 aaKnown RBP eCLIP15.26■□□□□ 0.036e-44■■■■□ 25.8
SF1-211ENST00000448404 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 SYBUQ9NX95 663 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 CDH23Q9H251 3354 aa15.26■□□□□ 0.03
SF1-211ENST00000448404 EEF2KO00418 725 aaKnown RBP15.25■□□□□ 0.03
SF1-211ENST00000448404 B4GALT3O60512 393 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 FAM200BP0CF97 657 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 ERCC2P18074 760 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 ETV4P43268 484 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 CPA2P48052 419 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 WASHC5Q12768 1159 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 SNCBQ16143 134 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 ARHGAP36Q6ZRI8 547 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 PID1Q7Z2X4 250 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 OR52K1Q8NGK4 314 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 RTP4Q96DX8 246 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 NPY6RQ99463 290 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 TRMT13Q9NUP7 481 aaKnown RBP15.25■□□□□ 0.03
SF1-211ENST00000448404 COPEO14579 308 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
SF1-211ENST00000448404 NDUFAF2Q8N183 169 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 RTP3Q9BQQ7 232 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 TACO1Q9BSH4 297 aaKnown RBP15.25■□□□□ 0.03
SF1-211ENST00000448404 STARD13Q9Y3M8 1113 aa15.25■□□□□ 0.03
SF1-211ENST00000448404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 IQANK1A0A1B0GTG1 560 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 MSI1O43347 362 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 SKAP2O75563 359 aaPredicted RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 DGKIO75912 1065 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 THP07101 528 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 SERPINB4P48594 390 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 NEK3P51956 506 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 EFHC1Q5JVL4 640 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 WLSQ5T9L3 541 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 RFX8Q6ZV50 586 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 ALYREFQ86V81 257 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 AGAP11Q8TF27 550 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 HSFY1Q96LI6 401 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 OLFM3Q96PB7 478 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 EBNA1BP2Q99848 306 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 TSSK1BQ9BXA7 367 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 CFAP69A5D8W1 941 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 EIF4E1BA6NMX2 242 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 ZWINTO95229 277 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 WARSP23381 471 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 SERPINB3P29508 390 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 CLNS1AP54105 237 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 NAIF1Q69YI7 327 aaPredicted RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 GPR152Q8TDT2 470 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 ATP2A3Q93084 1043 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 MYLPFQ96A32 169 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 STAMBPL1Q96FJ0 436 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 APOPT1Q96IL0 206 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 WDR6Q9NNW5 1121 aaKnown RBP15.24■□□□□ 0.03
SF1-211ENST00000448404 SENP1Q9P0U3 644 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 A0A0A0MRY4 1105 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 GABRDO14764 452 aa15.24■□□□□ 0.03
SF1-211ENST00000448404 ATP9BO43861 1147 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms