RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TPI1P60174 286 aa18■□□□□ 0.47
SMC6-206ENST00000446852 YWHAGP61981 247 aaKnown RBP eCLIP18■□□□□ 0.47
SMC6-206ENST00000446852 TPSAB1Q15661 275 aa18■□□□□ 0.47
SMC6-206ENST00000446852 ADGRD1Q6QNK2 874 aa18■□□□□ 0.47
SMC6-206ENST00000446852 C4orf50Q6ZRC1 276 aa18■□□□□ 0.47
SMC6-206ENST00000446852 DCAKDQ8WVC6 231 aa18■□□□□ 0.47
SMC6-206ENST00000446852 DYDC1Q8WWB3 177 aa18■□□□□ 0.47
SMC6-206ENST00000446852 FTHL17Q9BXU8 183 aa18■□□□□ 0.47
SMC6-206ENST00000446852 WDCPQ9H6R7 721 aa18■□□□□ 0.47
SMC6-206ENST00000446852 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
SMC6-206ENST00000446852 PLXNA3P51805 1871 aa18■□□□□ 0.47
SMC6-206ENST00000446852 FKTNO75072 461 aa18■□□□□ 0.47
SMC6-206ENST00000446852 OAZ2O95190 189 aa18■□□□□ 0.47
SMC6-206ENST00000446852 GRIA1P42261 906 aa18■□□□□ 0.47
SMC6-206ENST00000446852 GLUD2P49448 558 aa18■□□□□ 0.47
SMC6-206ENST00000446852 CDK7P50613 346 aa18■□□□□ 0.47
SMC6-206ENST00000446852 PDK1Q15118 436 aa18■□□□□ 0.47
SMC6-206ENST00000446852 ARL13BQ3SXY8 428 aa18■□□□□ 0.47
SMC6-206ENST00000446852 C4orf33Q8N1A6 199 aa18■□□□□ 0.47
SMC6-206ENST00000446852 NPWQ8N729 165 aa18■□□□□ 0.47
SMC6-206ENST00000446852 GDAP1Q8TB36 358 aa18■□□□□ 0.47
SMC6-206ENST00000446852 SH3TC2Q8TF17 1288 aa18■□□□□ 0.47
SMC6-206ENST00000446852 CFAP36Q96G28 342 aa18■□□□□ 0.47
SMC6-206ENST00000446852 IGLV3-25P01717 112 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 C1QAP02745 245 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 GRIK1P39086 918 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 HCAR3P49019 387 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 WASHC5Q12768 1159 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 KBTBD12Q3ZCT8 623 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 CCNYQ8ND76 341 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 DBF4BQ8NFT6 615 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 MZB1Q8WU39 189 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 SEC16BQ96JE7 1060 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 CYTH2Q99418 400 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.99■□□□□ 0.474e-8■□□□□ 9.9
SMC6-206ENST00000446852 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 PRPF39Q86UA1 669 aaKnown RBP17.99■□□□□ 0.47
SMC6-206ENST00000446852 TAX1BP1Q86VP1 789 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 STKLD1Q8NE28 680 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 ZCWPW1Q9H0M4 648 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 ABI2Q9NYB9 513 aaPredicted RBP17.99■□□□□ 0.47
SMC6-206ENST00000446852 KANSL3Q9P2N6 904 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 OR12D3Q9UGF7 316 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 TTLL3Q9Y4R7 772 aa17.99■□□□□ 0.47
SMC6-206ENST00000446852 PPP1R12AO14974 1030 aaPredicted RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 GATMP50440 423 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 EIF4EBP2Q13542 120 aaPredicted RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 MPP5Q8N3R9 675 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 CKAP2Q8WWK9 683 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 SIGLEC10Q96LC7 697 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 TRIM56Q9BRZ2 755 aaKnown RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 NKIRAS1Q9NYS0 192 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 SENP1Q9P0U3 644 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 SEPT10Q9P0V9 454 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 ZC3H7BQ9UGR2 993 aaKnown RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 ENPP3O14638 875 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 PRPF4O43172 522 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMC6-206ENST00000446852 SPAG6O75602 509 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 LRIG2O94898 1065 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 VIMP08670 466 aaKnown RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 MSH2P43246 934 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 WDR4P57081 412 aaKnown RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 GKAP1Q5VSY0 366 aaPredicted RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 BEND5Q7L4P6 421 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 SCN4BQ8IWT1 228 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 ZNF567Q8N184 647 aa17.98■□□□□ 0.47
SMC6-206ENST00000446852 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
SMC6-206ENST00000446852 TANC1Q9C0D5 1861 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 OPHN1O60890 802 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 HTRA3P83110 453 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 PLEKHG4Q58EX7 1191 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 C6orf89Q6UWU4 347 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 SCD5Q86SK9 330 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 DENND1AQ8TEH3 1009 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 SMC6Q96SB8 1091 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 HCSTQ9UBK5 93 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 GGA2Q9UJY4 613 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 TCP11X1B4DZS4 312 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 KCNK1O00180 336 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 IRAK2O43187 625 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 TYROBPO43914 113 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 FDFT1P37268 417 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 VARS2Q5ST30 1063 aaKnown RBP17.97■□□□□ 0.47
SMC6-206ENST00000446852 SDHAF4Q5VUM1 108 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 SPATS2Q86XZ4 545 aaKnown RBP17.97■□□□□ 0.47
SMC6-206ENST00000446852 RNF34Q969K3 372 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 EPAS1Q99814 870 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 NMUR1Q9HB89 426 aa17.97■□□□□ 0.47
SMC6-206ENST00000446852 FNDC1Q4ZHG4 1894 aaPredicted RBP17.97■□□□□ 0.47
SMC6-206ENST00000446852 TADA2AO75478 443 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 STK10O94804 968 aaKnown RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 KRT4P19013 534 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 PSMB4P28070 264 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 STX2P32856 288 aa17.96■□□□□ 0.47
SMC6-206ENST00000446852 RPA3P35244 121 aaPredicted RBP17.96■□□□□ 0.47
SMC6-206ENST00000446852 GPR15P49685 360 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms